Petroclostridium sp. X23: QKW49_23150
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Entry
QKW49_23150 CDS
T09049
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
petr
Petroclostridium sp. X23
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
petr03000
]
QKW49_23150
Transcription factors [BR:
petr03000
]
Prokaryotic type
Helix-turn-helix
Other families
QKW49_23150
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
MimR_N
GAF
AAA_2
AAA_5
HTH_30
AAA
PAS_9
AAA_PrkA
PAS_8
MCM
AAA_3
PAS
nSTAND3
Diguanyl_cycl_sensor
HTH_50
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WHH58656
LinkDB
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Position
4930221..4932092
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AA seq
623 aa
AA seq
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MLIADSKREIELSHERCKVLGIKEDRIFSRKIIDDTELQEKFAQNRKLIVTAAPYIEQLI
NFVKGCNFFALLTDGEGCILNASGDEKILSEAFDLKMVPGAFMNEESIGTNAMSLVIKTG
QPVQISGKDHFITAYHRWTCSAAPIKDNRGYLIGALNLTGYTQQVHPHTLGMVIAASNAI
EEMAKVKEFNKLQNLNSKHIISIFNSMPLAIVTSDISGNIKIHNNKAVELFGNTDNQLKA
KEMKYLVEDWDRVKNEICLGKSISQEINIMTLRSRFPCRLIANTVYNPEDDNIEIVHVFE
EAQKAKKKNEYQAYYTFDKIIGENENFLKIIQYAKKIADSKSTILILGESGTGKEVFAQS
IHNYSSRMDGPFIALNCGAIPNQLIESELFGYEEGAFTGAKKGGNLGKFELANGGTIMLD
EIGEMPLDMQTKLLRVLQEGVVTKIGSSKTISVDVRVIAATNKDLKKEVEMGRFRKDLYY
RLNVLPLYLPPLRQRKEDILLLIKYFMGNISEKLNKKEVEIHEEYLNAMLSYSWPGNIRE
LENVIELIINTESVPSGYFGQEEKNNDVLLSINKECLNMEHIEKEHLEKVLKKYKGNITR
SAQALGIRRNTLYSKIRKYEIEV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctaatagcggatagcaagcgcgaaatagaactctcgcatgagaggtgtaaagtttta
ggaattaaagaagaccggattttcagtagaaaaattatcgatgatacggagctgcaagaa
aagtttgctcaaaacaggaaactgattgttactgcggcgccttatatagagcagttgatc
aactttgtaaaaggctgcaacttttttgcactgcttaccgatggtgaaggatgtatttta
aatgccagcggagatgagaaaatactttctgaagcttttgatttaaagatggttcccggg
gcttttatgaatgaggaaagcatcggaaccaatgccatgtcgcttgtaattaaaaccgga
caaccagtacaaatttccggtaaagaccatttcattacagcataccatagatggacctgt
tcggcagcccctatcaaagataacagggggtacctaataggggcgttgaatttgacagga
tacacccagcaggtacatccgcatacattgggcatggttattgcagcctccaatgcgata
gaggaaatggcaaaagtcaaagaattcaacaagcttcagaatctgaacagtaagcatatt
atctcaatatttaattctatgccgctggctattgtaacttccgatataagcggaaatata
aaaattcataacaacaaagctgtagaattattcggcaataccgataaccagttaaaagcg
aaggaaatgaaatatctcgttgaagattgggacagagtaaagaatgagatatgtttaggt
aaaagtatttcccaggaaatcaatatcatgacgctgagaagtcggtttccatgccgtctt
attgccaatactgtctataatccggaagatgataatattgagatcgtacatgtttttgaa
gaagctcaaaaagcgaagaagaaaaatgaatatcaggcctactacacctttgataaaatt
ataggggagaatgaaaatttcctgaaaataatacagtatgcaaaaaaaattgcggacagc
aaatctactatcctcattttaggtgaaagtggaacggggaaagaagtgtttgcgcaatcc
attcataattacagcagcagaatggatggacctttcatcgcattaaactgtggtgccata
cctaatcaactgatagaatcggaactcttcgggtatgaagagggtgcttttaccggtgct
aaaaaaggaggaaatctgggtaaattcgaattggctaatggtgggaccatcatgttggat
gaaatcggagaaatgccgctggacatgcaaacgaaacttttaagggttcttcaagaaggt
gtagtcacaaaaatcggaagttcgaaaacgatctctgtggatgtaagagtgatcgctgcg
acgaataaagatctaaaaaaagaagtggaaatgggtagattcagaaaggatttatattat
aggctgaatgtgctgccgctgtatctgccgccattaagacagagaaaagaagatatattg
ctgctgataaagtattttatgggcaatatatcggaaaagttaaataagaaagaagtggaa
atacatgaagaatacctgaacgcaatgttgagttacagctggccgggaaatataagagaa
ttggaaaatgtaatagagcttatcatcaacacagaatcggtaccatcggggtatttcgga
caggaagaaaagaataatgatgtattgttgagcatcaataaagagtgcctaaatatggag
catattgaaaaagagcacttggaaaaggtgctgaaaaaatataaaggtaatatcactcga
tccgcgcaagctttgggaattagaaggaataccttatacagcaaaataaggaaatatgaa
attgaagtgtga
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