Petroclostridium sp. X23: QKW49_23980
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Entry
QKW49_23980 CDS
T09049
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
petr
Petroclostridium sp. X23
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
petr03000
]
QKW49_23980
Transcription factors [BR:
petr03000
]
Prokaryotic type
Helix-turn-helix
Other families
QKW49_23980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS_9
PAS
GAF
PAS_4
AAA_2
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
MCM
HTH_50
HTH_30
Pre_tape_measure
PAS_7
HTH_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WHH58814
LinkDB
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Position
5121772..5123730
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AA seq
652 aa
AA seq
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MDRNKLSEIKDYIINSHERCKKYNVDTERVFSNRIIDENELFSKLEAKQELIITAAPFMN
QLYDFVKGSNFFSILTDEEGCILNVIGDEEILSEAFSFKMISGASMNERDIGTNAMGTAL
VEGRPVQVSGKEHYIKVYHRWTCSASPIRNAEGEIIGSLDLTGYSEYVHSHTLGMVVAAA
NAIEKMLEIKKYADELSLAKKYNETVIDSIIAGILTSDMDGNIVTINHYVADMFGYDENE
MKKMKIWELFEGWNRVRAAVINKKSVTDEEVFVNARKNKLQFNLSTYPIFDEQQNIRNII
FLFKEVKKVRKLANKIMGRQAIYTFDKIVGKDENFLRVIEFAKKVADSRSNILIMGESGT
GKELFAQAIHNYSSRCEEPFVALNCGAIPRNLIESELFGYEEGAFTGAKTSGQPGKFEIA
DGGTIFLDEIGEMPLDMQTRLLRVIEEGTVSRIGSIKEIVVNVRVIAATNKDLNEEVRKG
NFRKDLFYRLNVLPIRLPPLRERKRDIILLIQYFMDRITKKLNKRSVKIPEEFMQQLLEY
EWPGNIRELENLIELIVNTESIPDSLEKRGSGVTPKTNINVNNFNGIIAYGEPDEDLKLE
RMEKLHILKVLSLYERNITLSAKALGIGRNTLYRKMQNYGIDCSEMDQCSNM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaacaagttatcggaaataaaggattatatcataaattcccacgaaagatgt
aaaaaatacaatgttgacaccgagcgggtattcagtaacagaatcattgatgaaaacgag
cttttcagcaagctggaagccaagcaggaattaattataacggcagcgcctttcatgaac
caattatatgactttgtaaaagggtcaaactttttctccatacttaccgatgaagaaggt
tgtattttgaatgtaatcggagatgaagaaatattatccgaagcgttttctttcaaaatg
atttccggagcatctatgaatgaacgtgatatcggaacaaatgccatggggacggcactg
gtggaaggcaggccggtacaagtatcgggaaaggaacattacatcaaggtttaccatcgc
tggacctgctctgcttcacctatcaggaatgcagaaggtgagatcatcggatctctcgat
ttaaccggttacagcgaatatgttcattcccatacccttggaatggtagtagctgccgca
aatgctatagaaaaaatgctggaaatcaaaaaatatgccgacgagctgtctttggccaag
aaatataatgaaacggttatagactctatcatcgcagggatactcacctctgacatggat
ggaaatatagtaaccattaatcactatgtggccgatatgtttggctatgatgaaaatgaa
atgaaaaagatgaaaatatgggagctgtttgaaggatggaaccgggtgagagcagctgtt
atcaataaaaagagtgtaacagatgaagaggtttttgttaacgcgaggaaaaataagctt
caatttaacttgagtacgtatcctatctttgacgagcagcaaaatataaggaatattatt
tttctttttaaagaagtcaaaaaagtcagaaaactggcaaataaaattatgggtcggcaa
gccatttacacttttgataaaatcgtaggcaaagacgagaattttttacgtgtgatcgaa
tttgcaaaaaaggtcgcagacagcagatccaatattttaattatgggtgaaagcggtaca
ggtaaagagctttttgcacaggcgatacacaattacagcagcagatgcgaggagcctttt
gtagccctgaactgtggtgcgatacccagaaacctaatagaatctgaattatttggttat
gaagagggtgcatttactggagcaaaaaccagcggccagcccgggaaatttgaaatcgct
gatggaggaacgatttttcttgatgaaattggggaaatgccgttagatatgcaaacccgg
ttgcttcgtgtcattgaagaagggacggtaagcaggataggtagcattaaagagattgtt
gtaaatgtaagggttattgcagctactaacaaggatttaaatgaagaagtcaggaaagga
aatttccgaaaagatttattttacaggctgaatgttttacccatcaggctgcctccttta
agggagcgaaaaagggatattattctgttgattcaatattttatggatagaatcactaag
aaattaaataaaagaagtgtgaaaattccggaggaatttatgcagcagcttttagaatac
gaatggccgggcaatataagagaattggagaatctgattgaattgatagtcaataccgaa
tccattcccgatagtcttgaaaagcgcgggtcgggtgttactcctaaaacgaacataaac
gttaataattttaatggaatcattgcttatggagagccggacgaagatcttaaattagaa
cgcatggaaaaacttcatatactaaaagtattgagtctatatgagaggaatatcactttg
agtgccaaagccttaggcataggcaggaataccttgtataggaagatgcaaaactatggc
atcgactgttctgaaatggatcaatgttctaatatgtaa
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