Petroclostridium sp. X23: QKW49_24875
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Entry
QKW49_24875 CDS
T09049
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QKW49_24875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
petr03019
]
QKW49_24875
03016 Transfer RNA biogenesis [BR:
petr03016
]
QKW49_24875
Enzymes [BR:
petr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QKW49_24875
Messenger RNA biogenesis [BR:
petr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QKW49_24875
Transfer RNA biogenesis [BR:
petr03016
]
Prokaryotic type
tRNA degradation factors
QKW49_24875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
DUF1773
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WHH58985
LinkDB
All DBs
Position
5305732..5307831
Genome browser
AA seq
699 aa
AA seq
DB search
MHKTFTMDLAGRPFTIEVGRLAQLASGSVLVRYGETVVIVTATASDKPREGIDFFPLSVD
YEERLYAVGKIPGSFMKREGKPTEKAILTSRVIDRPIRPLFPKDLRNDVTVVATVLSVEQ
DNSPEIAAMIGASAAISISDIPFNGPIGGVSVGLVNGKFIINPNTEQRDESILQLTVAGS
KEKIVMIEAGAKEVPEDVMLEAIMFGHEEIKKICSFIEDIVKEVGKPKFEYQSYQVDETL
YNDVKEYAIDKVKQAIDTDDKKTREENLRVVYDDVFEHFAEKYPDMQSQISETLYKLQKY
VVRRWILDEGKRVDGRGINDIRPLSAEVGILPRTHGTGLFSRGQTQVLTVATLGALGDVQ
MLDGLDEDESKRYMHHYNFPSYSVGETRPSRGPGRREIGHGALAERSLEPVIPSEEEFPY
AIRLVSEVLSSNGSTSQGSVCGSTLALMDAGVPIKAPVAGISVGLVTEGDRFITMTDIQG
LEDFFGDMDFKVAGTKKGITAIQMDIKIDGLTREIIEQALTETRDARYYILDEVMLKAID
RPREQLSAYAPKIITTNIDPDKIREVIGPGGKTIQKIIADTGVKIDIEDDGRVFISTADA
QAGEKALKIIEGIAKDIEIGQVYMGKVMRIMNFGAFVEFLPGKEGLVHISKLDRKRVEKV
EDVVNIGDEILVKVIEVDKQGRINLSRKDALPEVTEQEK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcataagacttttacaatggatttggcaggcagaccatttacgatagaggttggaagg
ctagcgcagcttgcaagtggctcggtgctggtacgttacggtgaaacggttgtaatcgta
acagcaacagcttcagataagccaagagaaggaattgacttctttcctttaagcgtagat
tatgaagaaagactttacgcagttgggaagatcccaggaagctttatgaaaagagaagga
aagcccacagaaaaggcgatattgacttccagggtgattgatagacccatccgtccgttg
tttccaaaagatttaagaaatgatgttactgtagtagctacagtgctttcggtagaacag
gacaattcccctgaaatcgcagcaatgataggtgcatcagcggcgatttctatttcggat
attccatttaacggacctattggaggtgtatctgtaggattagtgaatggcaagtttatc
attaatccgaatacggaacaacgggatgaaagtatcttacagcttactgtagcaggatct
aaagaaaaaatagtgatgattgaagccggagcaaaagaagtacctgaagatgtgatgctg
gaagcaatcatgttcggacatgaagagattaagaaaatctgcagcttcattgaagatatc
gtgaaagaagtaggtaaacctaagtttgaatatcaatcctatcaagttgatgagacgctt
tataacgatgtcaaggaatatgctattgacaaggtgaaacaagcaatagataccgatgat
aaaaagacaagagaagagaatcttagggttgtttatgatgacgtattcgagcattttgca
gaaaaatatccggatatgcaatctcagataagtgagacgctgtataagcttcaaaagtat
gttgttagaagatggatactggatgaaggcaagcgtgtagatgggcgaggtataaatgac
ataagacctttatctgctgaagtagggatactaccacgtactcacggcaccggattgttt
agtagaggacaaacccaggtgcttaccgtagcaacgctaggagctcttggagatgtacaa
atgctggatggtttagacgaagatgaaagcaagagatatatgcaccactataatttccct
tcctacagcgtaggagaaaccagaccttcaagaggtccgggaagaagagaaataggacac
ggtgcgctggctgaaagatcattggaacctgttatacccagcgaagaggaatttccatat
gcgattcgcttggtttctgaagtattaagttcgaatgggtcaacttcacaaggcagtgtc
tgcgggagtactcttgcgttaatggatgcgggtgtgcctataaaagcaccggttgccggt
atttctgtggggttggttaccgaaggtgatagatttattaccatgacggacatacaagga
ttagaagacttttttggcgatatggactttaaagtagccggtaccaagaagggtattacg
gcaattcaaatggatataaagattgatggtcttactcgtgaaatcatcgagcaggcatta
acagaaaccagagatgcaagatattatattttagatgaagtaatgcttaaggcaatagat
agaccgagagagcagctttcggcttatgcacctaaaatcattactacgaatattgatcct
gataaaatcagagaagtgattggaccgggaggtaagaccatacagaagattattgcggat
accggcgtaaagattgatattgaagatgacggaagagtatttatttcaaccgctgacgcg
caagcaggggaaaaggcattaaaaatcattgaaggcattgcaaaagatattgaaataggt
caagtttacatgggtaaagtcatgaggatcatgaattttggtgcttttgttgagtttcta
ccgggaaaagaaggtttggtccatatttccaaactggatagaaagcgtgttgaaaaagta
gaagatgtagttaatatcggagatgaaatacttgtcaaagtaattgaagtagacaaacag
ggcaggataaatctttccagaaaagatgcacttcccgaggttactgaacaagaaaaataa
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