KEGG   Petroclostridium sp. X23: QKW49_24935
Entry
QKW49_24935       CDS       T09049                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
petr  Petroclostridium sp. X23
Pathway
petr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:petr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QKW49_24935 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:petr03019]
    QKW49_24935 (rny)
Messenger RNA biogenesis [BR:petr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QKW49_24935 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH Intein_splicing
Other DBs
NCBI-ProteinID: WHH58996
LinkDB
Position
5322608..5324185
AA seq 525 aa
MCAITFTTGEMLIMIAVALAAAIGSGMIFFQLGIKYRKKIAEAEIGSAEEEAKRIVNDAY
KAAESKKREALLEAKEEIHKNRIEFDREVKERRNEIQRQERRMQQKEETLDRKVESLESK
EEILNKKNKEVQVLQEQTLEVQKKQMEELERISGLTVDEAKTFLLKNVENETKHEAAIMI
KEIEAKAKEEAEKKAKDIISTAIQKCAADHVAETTVSVVPLPNDEMKGRIIGREGRNIRT
LETLTGIDLIIDDTPEAVILSGFDPIRREVARVALEKLIVDGRIHPARIEETVERARKEV
ENTIRQEGEHATFETGVHGLHPELIKLLGKLKFRTSYGQNVLKHSIEVAHLAGIMAGELG
VDVNIAKRAGLLHDIGKAVDHEVEGSHVMIGTDIAKKYRESQDVIHAIMAHHGDVEPETI
VACLVQAADTISAARPGARRENLETYIKRLQKLEEIANSFNGVDKSFAIQAGREIRIMVK
PEDLTDEGTILVAKDIVKKIENELEYPGQIKVNVIRETRAIEYAR
NT seq 1578 nt   +upstreamnt  +downstreamnt
gtgtgtgctattacatttacaactggagaaatgcttataatgattgcagttgcgcttgct
gcagcaataggttcaggtatgatttttttccaattgggaattaaatatagaaaaaaaatt
gctgaagctgaaattggtagtgcggaggaagaagcaaaacgtatagttaatgatgcttat
aaggctgctgagagtaaaaaaagggaagcattattagaagcaaaagaagaaattcataag
aatagaattgagtttgacagagaagttaaagaaagaagaaatgaaattcaacgccaagag
agacgaatgcagcaaaaggaagaaacacttgacagaaaagttgaatctcttgaatcgaaa
gaagaaattcttaataaaaagaataaagaagtacaagtccttcaggagcaaacgttggag
gtacaaaagaagcaaatggaagagcttgaaagaatatccggattaacggtagacgaagca
aaaaccttcttgcttaaaaatgtggaaaatgaaactaagcatgaagcagctatcatgatc
aaggaaattgaggctaaagcaaaagaagaggctgaaaagaaagcaaaagatattataagt
actgccatacaaaaatgtgcggcagaccatgtagctgaaacgacagtttcggttgtccct
ctacctaatgatgaaatgaaaggaagaattattggtagagaagggcgaaatatcagaacg
cttgaaactttaacagggatagatttgattatcgacgatacacctgaagcggttatatta
tcaggttttgatcctataagaagggaagtagcccgagtagcgcttgaaaaactgattgtt
gacggtcgtattcatcctgcacgtatcgaggaaacggtagaacgagctaggaaagaagta
gaaaataccatcagacaagagggtgaacatgctacttttgagacaggcgtacacggtctt
catcctgaattaataaagttattaggtaaactgaaatttagaaccagttatggtcaaaat
gtgcttaagcactctatagaagtagcacatcttgccggtattatggccggagaattaggt
gtggatgttaatatagcaaagagagcaggacttctgcatgatattggtaaggctgttgac
cacgaggttgaaggttctcatgtaatgattggtactgatattgctaagaaatacagagaa
agccaggacgtaatacatgcaattatggcgcaccatggggatgttgaaccggagaccatt
gttgcatgtctcgtacaagctgccgataccatttcagctgcaagacccggcgcgagaaga
gaaaatcttgaaacctatattaaacggttacaaaaacttgaggaaattgcaaattcattt
aatggtgtagataaatccttcgctatccaggcagggagagaaataagaatcatggttaag
ccagaggatttaactgatgaaggaacaatattggttgctaaagatattgtaaagaaaatt
gaaaacgaattggaatatccaggtcagattaaagtaaacgttattagagagactagagca
atcgaatacgcaagatag

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