Petroclostridium sp. X23: QKW49_24935
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Entry
QKW49_24935 CDS
T09049
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QKW49_24935 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
petr03019
]
QKW49_24935 (rny)
Messenger RNA biogenesis [BR:
petr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QKW49_24935 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
WHH58996
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Position
5322608..5324185
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AA seq
525 aa
AA seq
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MCAITFTTGEMLIMIAVALAAAIGSGMIFFQLGIKYRKKIAEAEIGSAEEEAKRIVNDAY
KAAESKKREALLEAKEEIHKNRIEFDREVKERRNEIQRQERRMQQKEETLDRKVESLESK
EEILNKKNKEVQVLQEQTLEVQKKQMEELERISGLTVDEAKTFLLKNVENETKHEAAIMI
KEIEAKAKEEAEKKAKDIISTAIQKCAADHVAETTVSVVPLPNDEMKGRIIGREGRNIRT
LETLTGIDLIIDDTPEAVILSGFDPIRREVARVALEKLIVDGRIHPARIEETVERARKEV
ENTIRQEGEHATFETGVHGLHPELIKLLGKLKFRTSYGQNVLKHSIEVAHLAGIMAGELG
VDVNIAKRAGLLHDIGKAVDHEVEGSHVMIGTDIAKKYRESQDVIHAIMAHHGDVEPETI
VACLVQAADTISAARPGARRENLETYIKRLQKLEEIANSFNGVDKSFAIQAGREIRIMVK
PEDLTDEGTILVAKDIVKKIENELEYPGQIKVNVIRETRAIEYAR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgctattacatttacaactggagaaatgcttataatgattgcagttgcgcttgct
gcagcaataggttcaggtatgatttttttccaattgggaattaaatatagaaaaaaaatt
gctgaagctgaaattggtagtgcggaggaagaagcaaaacgtatagttaatgatgcttat
aaggctgctgagagtaaaaaaagggaagcattattagaagcaaaagaagaaattcataag
aatagaattgagtttgacagagaagttaaagaaagaagaaatgaaattcaacgccaagag
agacgaatgcagcaaaaggaagaaacacttgacagaaaagttgaatctcttgaatcgaaa
gaagaaattcttaataaaaagaataaagaagtacaagtccttcaggagcaaacgttggag
gtacaaaagaagcaaatggaagagcttgaaagaatatccggattaacggtagacgaagca
aaaaccttcttgcttaaaaatgtggaaaatgaaactaagcatgaagcagctatcatgatc
aaggaaattgaggctaaagcaaaagaagaggctgaaaagaaagcaaaagatattataagt
actgccatacaaaaatgtgcggcagaccatgtagctgaaacgacagtttcggttgtccct
ctacctaatgatgaaatgaaaggaagaattattggtagagaagggcgaaatatcagaacg
cttgaaactttaacagggatagatttgattatcgacgatacacctgaagcggttatatta
tcaggttttgatcctataagaagggaagtagcccgagtagcgcttgaaaaactgattgtt
gacggtcgtattcatcctgcacgtatcgaggaaacggtagaacgagctaggaaagaagta
gaaaataccatcagacaagagggtgaacatgctacttttgagacaggcgtacacggtctt
catcctgaattaataaagttattaggtaaactgaaatttagaaccagttatggtcaaaat
gtgcttaagcactctatagaagtagcacatcttgccggtattatggccggagaattaggt
gtggatgttaatatagcaaagagagcaggacttctgcatgatattggtaaggctgttgac
cacgaggttgaaggttctcatgtaatgattggtactgatattgctaagaaatacagagaa
agccaggacgtaatacatgcaattatggcgcaccatggggatgttgaaccggagaccatt
gttgcatgtctcgtacaagctgccgataccatttcagctgcaagacccggcgcgagaaga
gaaaatcttgaaacctatattaaacggttacaaaaacttgaggaaattgcaaattcattt
aatggtgtagataaatccttcgctatccaggcagggagagaaataagaatcatggttaag
ccagaggatttaactgatgaaggaacaatattggttgctaaagatattgtaaagaaaatt
gaaaacgaattggaatatccaggtcagattaaagtaaacgttattagagagactagagca
atcgaatacgcaagatag
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