Populus euphratica (Euphrates poplar): 105107615
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Entry
105107615 CDS
T05872
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105107615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105107615
Spliceosome [BR:
peu03041
]
Complex A
U1 snRNP components
U1 related factors
105107615
Complex B
105107615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
105107615
NCBI-ProteinID:
XP_010999909
UniProt:
A0AAJ6WZK9
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MASNPQSSGGQFRPMVPAQQGQPFIQVASQQFRPVGQGIPSSHVGMPAAQSQHLQFSQPI
QQLPPWPNQPGAPPAQALSMPYGQLNRPLTSSQPQQNAPPLSNHMHVVGTSGVPNSSPYA
FAPSSFGLTQNSASAMPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLVPPVQPAVAQPSI
SSSSDSTVAVSSNSQQSLSDWQEHTASDGRRYYYNRRTKQSSWDKPFELMTPIERADAST
VWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTAGQGNQSETDAASNVPTAVA
VTSSETSTTAISVSSSSVMLPGVSSSPISVAAVANPPPVVVSGSPALPVAHSTTASAVGV
QPSVTPLPTAVSVGTGAPAAAVDAKTTSLSSIDNLLSQSAANSVDGASMMDTAEFNKVSM
DMGKTNASPLEEKTPDEEPLVFANKLEAKNAFKALLESANVQSDWTWEQTMREIINDKRY
AALKTLGERKQAFNEYLGQRKKLEAEERRVRQKKAREEFAKMLEESKELTSSMKWSKAIS
LFENDERYKALERARDREDLFDSYIVELERKEKEKAAEDRRRNVAEYRKFLESCDFIKAN
SQWRKIQDRLEDDERCLCLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDE
FRKLLEEHVASGFLTAKTHWLDYCLKVKDLPQYQAIATNTSGSKPKDLFEDVSEELEKQY
HDDKTRIKDAMKLGKITMVSTWTFEDFKGAVADDIGSSPISDINLKLLYEELVERAKEKE
EKEAKKQQRLVDDFTKLLYTLKEVTPSSNWEDCKPLFEESQEYRSIGEESLSKEIFEEYV
THLQEKAKEKERKREEEKARKEKEREEKDKRKEKERKEKEKEKEKEREREKGKQRTKKND
TDGENVDASDGYGHKDDKKREKDKDRKHRKRHQSAIDDVNSDKDEKEESKKSRKHNSDRK
KSRKHAYTPESDGESQHKKHKRDHRDGSRRNGSNEELEDGELGDDVEIRKQHVAVEFDI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatcctcaatcttctggtggacagtttcgaccaatggttccggcacagcaa
gggcagccattcattcaggtggcttcccaacagtttcggccagttggacaaggtatacct
tcttcacatgttgggatgccagctgctcaaagtcagcacctgcagttttctcaacctatc
cagcagttaccgccatggccaaatcagcccggggcacctccggcacaggctttatcaatg
ccttatggtcaattaaacaggcctctgacatcatcacagccccagcaaaatgcccctcca
ttaagtaatcacatgcatgtggttggcacctctggagttcctaattcctcaccatatgct
tttgcaccatcttcttttggccttacacaaaacagtgccagtgcaatgccccagttccca
ccaatgtctcaaatgcatgcacatgttgtacccatggggggacaaccttggttgtcctct
ggaagtcatggtgcttcacttgttcccccagtccagcccgctgttgcccagccttctata
tcttcttcctcagattcaacagtagctgtttctagcaatagtcaacagtctttgagtgat
tggcaggaacatacagcgtctgatgggaggaggtattattacaacaggagaacaaaacaa
tctagttgggataagccctttgaattgatgacaccaattgagagggctgatgcatcgact
gtttggaaggaattcacaactcaagaggggaagaagtattactacaacaaggttacaaag
caatctaagtggtcaattcctgaggaattgaagatggctcgtgaacaggcgcaacaaaca
gctggccaggggaatcaatcagaaaccgatgcagcttcaaatgtcccaactgctgttgct
gttacctcaagcgaaacatccaccacagctatctcagttagctctagctctgttatgtta
ccaggggtctcttcaagcccaatttcagtcgctgctgttgctaatccacccccagtggta
gtttctggatcaccagctcttcctgttgcacattctaccacagctagtgctgtaggtgtc
caaccctctgtgactcctttacccactgctgtttcagtaggtactggagctcctgctgca
gcagttgatgcaaagacaacatcactgagtagcattgataatctattatctcaaagtgct
gcaaattctgtagatggagcatctatgatggatactgcggaattcaataaagtatcaatg
gatatgggaaaaactaatgccagtcctttggaggagaagaccccagatgaggaaccttta
gtatttgccaacaagctggaggcaaaaaatgcattcaaagctcttctagaatccgcaaat
gtccagtctgactggacttgggagcagacgatgagagagatcataaatgacaaaagatat
gctgctttaaaaactcttggtgagcgaaagcaagcatttaatgagtacttaggtcaaagg
aaaaaactagaagctgaggagaggcgtgtaagacagaaaaaggctcgggaagagtttgcc
aagatgttggaagagtctaaggaattgacttcatccatgaaatggagcaaagctataagt
ctgtttgaaaatgatgaacgatacaaagctcttgagagagccagagaccgagaggatctt
tttgacagctacattgtggaacttgagaggaaggaaaaggagaaggctgctgaggaccgt
aggaggaatgtagcagaatatagaaaatttctggagtcctgtgatttcatcaaggccaac
agccaatggcggaaaattcaagatcgcttagaggatgatgagcggtgcttgtgtcttgaa
aaacttgaccgtttactcattttccaggattatattcgtgacttggagaaagaggaagag
gaacaaaagaagatacaaaaggagcaattgagacgggctgaaaggaaaaatcgtgatgaa
tttcgcaaattgttggaagaacatgttgcttctggcttccttacagctaaaactcactgg
cttgactactgtttgaaggttaaggatttgcctcaatatcaggccattgcaacaaacacg
tctggctcaaagccaaaagacctctttgaggatgtttctgaagaactagagaaacaatat
catgatgataaaactcgaataaaggatgcaatgaagctgggcaagattaccatggtgtca
acatggacatttgaagacttcaagggtgctgttgctgatgatattggttcttcaccaata
tcagatatcaacctaaagcttttatacgaggagctagttgaaagagccaaggagaaggag
gagaaagaagctaaaaaacagcaacgtcttgttgatgatttcactaaattactgtatact
cttaaggaagtaactccttcttcgaactgggaggattgcaaaccgctttttgaggagagc
caggaatacaggtcaattggggaagagagtttgagcaaggaaatttttgaagaatatgtc
acacacttacaggaaaaggccaaagagaaggaacgcaagcgtgaggaagaaaaggccagg
aaggagaaagagagagaggaaaaagacaagagaaaagagaaggagaggaaggagaaggag
aaagagaaagagaaagaacgtgagagggaaaaaggaaagcaacggacaaaaaagaatgac
acagatggtgaaaatgttgatgcaagtgatggttatggccacaaggatgacaaaaagagg
gaaaaggacaaagataggaaacaccggaaacggcatcaaagtgccattgatgatgtaaat
tctgacaaggatgagaaagaagagtctaaaaaatcacgcaagcataacagtgaccgtaaa
aaatctagaaagcacgcatacacacctgaatcagatggtgaaagtcagcataaaaagcac
aagagagatcaccgtgatggttcccgcagaaatggcagtaatgaggagcttgaagatggg
gagcttggtgatgatgtggaaatccgcaaacaacatgtggcagtggagtttgatatctga
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