Populus euphratica (Euphrates poplar): 105107756
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Entry
105107756 CDS
T05872
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105107756
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105107756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
105107756
NCBI-ProteinID:
XP_011000097
UniProt:
A0AAJ6SWU1
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MRNSNSNPSGSGSVPRGIGLSNSIHSEVAPCLPLPSLPVFCGASDPELRLFDGASARHSN
FWFLNRNEILSQSSRIADLLRQTDVSYLTLRDENRETATDNVERLELYEEVLRCNPDAFE
YVTHGKQSKGQISGNAAFESKRIELSVPVSYQAQRDYDGFQNHQPKYTPNDIASSLRKPK
VKKKGSDDISAVIQPDPAELQDATIGSFCDMLEDFCGRAEVPGDDREEAEWLSLPAADLR
KLVNEITSLRAKKLLNLIPVEVLVRLLRVLDHQIHRAEGLSIDECEHSDSEVVSYVFCAL
ESIHAALAVMAHNNMPKQLYKEEIIERILEFSKHQIMDVMSAYDPSYRALHRPSENGAPE
GYEDEEPDPDYGSANKKRRTVKSVRVKKSSSNRVSGAVNTILQKLCTILGLLKDLLLIER
LSDSCILQLVRTSFTTFLVDNIQLLQMKAIGLICGIFYSYIQHRPYIIDEIVQLLWKLPS
SKRALRAYHLPDEEQRQIQMVTALLIQLVQSSANLPDALRQASSGNSILEVSLDASYPIK
SHEAATETCCLFWTRVLQRFTTVKNQDASEMKVMMENLVTDLLTTLNLPEYPSSSPILEV
LCVLLLQNAGLKSKDVSARSMAIDFLGTIAARLKQDALICSGNKFWILQELSCGDDVDLS
FPKDACCVCLDGRVENRLFMCPGCHRLFHADCMGVREHEAPNRSWHCMICLCKNQLLVLQ
SYSDSHYKDEEKKDNIRSKKNNLDASDTVTKAEIVQQMLLNYLQDVVSADDAYLFVRWFY
LCLWYKDDPKSKQKFMYHLTRLKSNLIVRDSGTAFSLLTRDSVKKIALALGQNSSFCRGF
DKILHMLLASLRENSPVIRAKALRAVSIIVEADPDVLRDKRVQLAVEGRFCDSAISVREA
ALELVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRAIKIIRDMCISNPNFTQFTTACI
EIISRVSDDESSIQDLVCKTFYEFWFEEPSGSRTQFFGDGSSVPLEVAKKTEQIVEMLRR
MPSHQLLVTVIKRNLALDFFPQSAKAVGINPVSLASVRKRCELMCKCLLERILQVEEMNS
DEVELCTLPYVLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQVDNRAIAQLLESIIF
IIDSVLPLIRKLPQSVVEELEQDLKQMIVRHSFLTVVHACIKCLCSLSKVAAKGASVVEY
LIQVFFKRLDAQGIDNKQLAGRSLFCLGLLIRYGNSLLSISNNKNIDVASSLSLFKKHLL
MEDFSIKVRSLQALGFVLIARPEFMLEKDIGKILEATLSSGSHVRLKMQALQNVHEYLLD
AESQMDTDKTNSVAHHPVEGSNSVPVAAGAGDTNICGGIVQLYWDHILGRCLDFNEQVRQ
TALKIVEVVLRQGLVHPITCVPYLIALETDPQELNSKLAHHLLMNMNEKYPAFFESRLGD
GLQLSFIFMKSVVNISPEIPNQKLQSKTAGNLKGKPEGGSLSQARLGVSRIYKLIRGNRV
SRNKFMSSIVRKFDNPSRSDSVIPFLVYCTEMLALLPFTLPDEPLYLIYVINRVIQVRAG
ALEANMKGLILHFSQRNARMVNENGFIQRELAEPVSHHMDMNGTIQPKPDGQPDHSPLRS
FDLNGTVQEQPADHAVLNSSVSRYPKMERVSSGESVGISKDDVEKIQVDCLAATALELLL
KLKRHLKIVYGLNDARCQAFSPTEPPKPGEAFSRQNIPFDMSQTGTSLPSTYQDLVQRYQ
EFKGALKEDTVDYSTYTANIKRKRPAPRKVKSGRVMGDDEDDDEDEDWASGGRRLGSGRK
GNSSRSRHRQ
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattcaaattcaaatccaagcggttcgggttcggttcctagaggaatcggcctg
tccaacagcatacactctgaagttgcgccgtgtttgcccttgccttcgcttcctgttttc
tgtggcgcttcggatccggagctccggctgttcgacggagctagtgctagacatagtaat
ttctggtttttgaatcgaaatgaaattctgtctcagtcttccagaatcgctgatctgctt
cgtcaaaccgacgtatcctacctgacacttagagatgagaatagggaaactgcgactgac
aacgtggagcggttggaactttatgaagaggttcttcgctgcaatcctgatgcatttgag
tatgttactcatggtaaacaaagtaaggggcaaatttctggaaatgcagcatttgaaagc
aagcgcattgagctaagtgtacctgtttcgtatcaagcacaaagagattatgatggattt
caaaatcaccaaccaaaatacacccctaatgacattgcctcatctctgaggaaaccaaaa
gtcaagaaaaaaggcagtgatgacatttcagcagtgattcagccagatcctgctgagctt
caagatgcaacaattggaagcttctgtgatatgttggaagacttttgtggaagagctgaa
gttcctggtgatgatcgggaagaagcagagtggttatcgttgcctgctgctgacctcaga
aagcttgtgaatgaaataacatcgttacgtgcaaaaaagcttttaaatttgatccccgta
gaagttcttgtaagactcttgagggttctggatcaccaaatacatcgagctgaaggctta
tccattgatgaatgtgaacattcagattcagaagtagtctcctatgtcttctgtgcgctg
gagtctattcatgcagctctagctgtaatggcgcataataacatgccaaagcagctgtat
aaagaagagattattgaaagaattttggagttctctaagcatcaaataatggatgtgatg
tctgcatatgatccatcatatcgtgctttgcataggcctagtgaaaatggggcacctgaa
ggttatgaagacgaagagcctgaccctgactatggttcagctaacaagaaacggcgaact
gtaaagagtgtaagagtgaagaagtcatcatcaaacagggtctctggtgctgtgaatact
atactacaaaaactgtgcacaatactcggtttactgaaggatttgttgttgatagagagg
ttatctgatagttgcattctacagttggtgaggacaagctttacaacttttttggtggac
aatatccaacttttgcagatgaaggctattgggttaatctgtgggatattctattcatac
attcagcatcgtccatacataatagacgaaatagttcagctactctggaagttaccatcc
tcaaagcgagcactaagagcctatcacctgcctgatgaagaacagaggcagattcagatg
gtcactgctttactgattcagttggttcagagcagtgcaaaccttcctgatgctttgagg
caagcatcgagtggtaattccatcttagaagtctctttggatgctagttatcctatcaag
tcccatgaagcagccacagagacctgctgtcttttctggacccgagttctccagcgcttc
acaactgtcaagaatcaagatgcttctgaaatgaaagtgatgatggagaatcttgttaca
gatctactaacaactctcaatttaccagaatacccttcttcgtctcccattctggaggtt
ctttgtgtcttactacttcagaatgctggactgaaatccaaggacgtctctgcacgttcc
atggccattgattttctgggcaccattgcagcaaggctaaagcaggatgcacttatttgt
agtgggaacaaattttggatattgcaggaactgagttgtggggatgatgtggatctgagt
ttcccaaaagatgcatgctgtgtttgcttagatggaagggtggagaacaggttgtttatg
tgtccgggttgtcacagattgtttcatgctgattgcatgggagtgagagaacatgaagct
cctaatcgaagctggcactgtatgatttgcctctgcaagaatcaacttcttgtgttacaa
tcttacagcgattcacattacaaggatgaggagaaaaaggataatatccggtcgaagaag
aacaatttggatgcttcagatacagtaacaaaagctgaaattgttcaacaaatgctttta
aattacctccaagatgttgtatctgctgatgatgcatacctctttgttcgctggttttat
ttgtgcttgtggtacaaggatgacccgaaatctaaacaaaagtttatgtaccatctcact
agactgaaatcaaaccttatcgtgcgtgattctgggactgcattttcattgttgacgagg
gattctgttaagaagattgctttagcactgggacaaaatagttctttttgtagagggttc
gataagattcttcatatgcttttggcaagtttgagggagaattctcctgtaattagggcc
aaggcattacgagcagtcagtattattgtagaagctgatcctgatgtattacgtgacaag
cgagtacaattggctgttgaaggaagattttgtgattcagcaatatctgtgagagaagct
gcattggaacttgttggtaggcatattgcttcacaccctgatgttggtctgcagtatttt
gagaaggttgctgaaaggataaaagacactggagtgagtgtgagaaaacgagctatcaaa
atcatcagagacatgtgcatttcaaatccaaacttcactcaatttacaactgcatgtatt
gagatcatatcccgtgtcagtgatgacgaatccagtattcaggatcttgtctgcaaaaca
ttttatgagttttggttcgaggaaccttctggatcgcgaacacaattttttggagatggc
agttctgtgccactggaggtggctaagaagactgagcaaattgttgagatgttgaggagg
atgccaagtcatcagcttcttgtcacagtcatcaagcgcaatctagcacttgactttttc
cctcaatcagctaaagctgttgggatcaaccctgtgtcccttgcatcagtgcgcaagcgc
tgtgagttgatgtgcaagtgcttactggaaagaatactgcaggtagaggaaatgaatagc
gatgaagtggagctctgcacacttccttatgtgcttgcattgcatgcattttgtgttgtt
gatccaacgctttgtgcacctgcttctgatccctcccagtttgttgttactcttcagcca
tatctcaagagtcaggttgataaccgagctattgcacaattattggagagtataatcttt
ataattgattctgttcttcccttaatccgaaagctgcctcagagtgttgttgaagaacta
gagcaagatctgaagcaaatgattgttcgacattcgtttttgacagtggtccatgcttgc
atcaagtgtctttgttctttgagtaaagtagcagcaaagggtgctagtgtagttgagtat
cttattcaggtttttttcaaacgtttggatgctcaaggaatcgataacaagcagctagca
ggccgctctttgttctgtcttggattgcttattcgctatggaaactctttgctgagtatc
tccaacaacaaaaatattgatgttgcgagcagtctcagtttgtttaaaaagcatctcctt
atggaggatttcagtataaaagtcaggtctttgcaggcattaggatttgttcttattgct
aggcctgagtttatgctggaaaaggacattgggaaaatattggaggcaactttatcttct
ggttctcatgttcgtcttaagatgcaagctttgcaaaatgtgcatgaatatcttctggat
gctgaaagccaaatggacacagataagactaatagtgtagctcatcatcctgtagaaggg
agcaacagtgtacctgttgctgctggtgcaggtgatactaacatctgtggtggtatagtc
cagctgtattgggatcatattttgggaaggtgcttggacttcaatgaacaagttcgccag
actgctcttaagattgtggaagtagtactacgccagggtctggtccatcctataacctgt
gttccatatctaatagcattggaaacggatcctcaagagttaaactcaaagttagcccac
catttgctgatgaatatgaatgagaagtatcctgctttttttgaaagccgattgggtgat
ggccttcagctgtcatttatattcatgaaatctgttgttaatatttctcctgaaattcca
aaccaaaaactccaatctaagactgctggaaatctcaagggaaaacctgaaggtggttcc
ctatctcaagcaaggcttggggtttctcggatatacaagcttattcgtggaaaccgagtt
tcacggaacaaatttatgtcctcaattgtgcgaaaatttgacaatccaagccggagtgat
tcagtgattccttttttagtgtactgcacggaaatgcttgctttgctgccatttacttta
cctgatgaacctctgtatttgatttatgttataaatcgagttattcaagtaagagcaggg
gcacttgaagcaaatatgaagggactaatcttacatttttcccaaagaaatgctcgaatg
gttaatgaaaatgggttcattcaaagggaacttgcggagcctgtttcccatcacatggac
atgaatggtacaattcaaccaaagccagatggtcagcctgatcacagtcctttgagatca
tttgatctgaacggaacagttcaagaacagcctgctgatcatgcagttctaaactctagt
gtctcaagatatccaaagatggagcgtgtgagctctggtgagtccgtaggcatctccaaa
gatgatgtggagaaaatccaggttgactgcctcgcagcaactgctttggagcttcttttg
aagctcaagagacacctgaaaattgtgtatggccttaatgatgctcggtgccaggctttt
tctcccactgaacccccaaagccaggagaggctttctcaaggcagaacattccttttgac
atgagtcaaacaggcaccagtttgccgtctacctatcaagatttggttcagagatatcag
gaattcaagggagccttaaaggaagatactgttgattactccacgtacacagcgaatatc
aagaggaaacgacctgccccaagaaaggtgaaatctggacgtgtgatgggagacgacgag
gatgacgatgaggatgaagactgggcgtccgggggtcggaggctgggcagcggaaggaaa
ggcaacagcagtagaagtaggcaccggcaatag
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integrated database retrieval system