Populus euphratica (Euphrates poplar): 105108005
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Entry
105108005 CDS
T05872
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105108005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
peu03009
]
105108005
Enzymes [BR:
peu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
105108005
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
90S particles
Other 90S particles
105108005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
105108005
NCBI-ProteinID:
XP_011000435
UniProt:
A0AAJ6SXE6
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MVRPYGKGHKRKKKGERYDKEEDEAEDKQVEEENTDDETEISAQDAEEKTEEEREELPEL
EGFPVGPSTQTAKKPGVIFVLEKASLEVAKVGKNYQILNSEDHANFLRRNNKNPADYRPD
IIYQALLSILDSPLNKAGCLRAVYVKTDKGVLFEVKPYVRIPRTYKRFAGIMLQLLQKLS
IAAVGKREKLLRVIKNPVTQHLPLNSRKIGFSHSSDKLVEMEKYVAGVGGDTDLVFVVGA
MSHGKIECDYIDDFISVSEYPLSAAWCIARICEAVSKKWRVL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccttatggtaaagggcacaagagaaagaagaaaggggagaggtatgataaa
gaagaagatgaagcggaagataaacaagttgaagaagagaacactgatgatgagaccgaa
ataagcgcacaagatgctgaagaaaaaacagaagaggaaagagaagaactaccagaattg
gagggctttcctgttggcccaagtactcaaactgccaaaaaacctggggtcatatttgtg
ctggaaaaggcatctttggaagttgcaaaagttggaaagaattaccaaattttgaattct
gaggaccatgccaatttcctgaggaggaataataaaaatcctgctgattacaggcctgac
atcatttatcaggctctcctatccatcttagatagcccattgaataaggctgggtgtttg
cgagctgtatatgtgaaaacagataaaggtgttctttttgaagtcaagccatatgttcgt
attccaaggacttataagcgttttgctggtattatgttgcagctgcttcaaaagcttagt
attgctgctgttggcaagcgtgagaagcttttgcgcgtgatcaagaatcctgtaacccag
cacctacctttaaactctcgtaaaataggcttctcccatagctcagacaaattggtcgaa
atggagaagtatgtagccggagttggtggtgacactgaccttgttttcgtggttggtgct
atgtcccatggtaaaattgaatgtgattatatagatgattttatatcagtttcagaatat
ccgctgagtgctgcctggtgtattgcaaggatatgtgaggctgtgtcaaagaagtggcgt
gtactgtaa
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