Populus euphratica (Euphrates poplar): 105108194
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Entry
105108194 CDS
T05872
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04120
Ubiquitin mediated proteolysis
peu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105108194
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105108194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105108194
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105108194
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105108194
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105108194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_DCAF4
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_HPS5
WD40_like
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
zf-RING_UBOX
Baculo_p24
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105108194
NCBI-ProteinID:
XP_011000702
UniProt:
A0AAJ6SX67
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MGGESSVGALVPTVNSEATNSKMPPPTEELDKDMFPICMQIIKDASVTSCGHSFLMPVEA
KDCNDCPCCAHYLTYNHNFPNVLLNKLLERTYARQVAKTASPYEHLRQALQQGCGVSFAV
VDGLMALLAEKKRKMEQEEADTNMRILLDFLYCLSKQKLDDLNEIQTDLHYIEEDINSVE
KKRIELSRASDRLSLKLGMFADDPNSKFFTQSEANASKKKWVRAQFNALQECYLQKRRNW
VRQACKEEKRDADTSNREGYNPGLEDFHSVLTNFTRCSQFRVVAELRQGGLFHSANIVSS
IEFDRDDELFATAGVYRRIKIFEFSKVMNEPEDVHCPVVEMSTRSKLSCVSWNKYMKNHI
ASSDYEGIVTVWDVTTRQSIMEYDEHEKRAWSVDFSQNEPSMLVSGSDDCKVKIWSTKQE
SSVLNIDMKANVCSVKYNPGSSIHVAVGSADHHIHYYDLRNISQPLYVFSGHRKTVSYVK
FLSSNVLASASTDSTLRLWDVKENLALRTFRGHTNEKNFVGLAVNNEYIACGSETNEVFV
YHKAISKPAASHRFSIDLENGGDDAGSYFTSAVCWKSDSPTMLAANNQGTIKVLVLAA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagagagctcagtcggggcactagtccccaccgtgaattccgaggcaactaac
tccaaaatgccaccaccaacggaggagttagacaaggatatgtttcctatttgcatgcag
ataattaaggatgcttccgtcacttcttgtggacatagcttcttgatgcccgtggaagct
aaagattgcaatgactgtccttgttgcgctcattacctcacctacaaccataactttcct
aatgttttgctaaataagttattggagagaacttatgctcgtcaagtagccaagactgca
tcaccttatgaacatcttcgccaggcattacaacagggttgtggagtgtcatttgcggtg
gtagatggccttatggccctccttgcagagaaaaagagaaagatggagcaagaggaagca
gatacaaatatgcgaattttacttgacttcttgtattgcctcagcaagcaaaagcttgat
gatctcaatgagattcaaacagatctccactacattgaggaggacataaattctgtggag
aagaaaagaatagagttatccagggcaagtgacagactctcactgaaacttgggatgttc
gctgatgatccaaattctaagttttttactcaatcagaagcaaatgcatctaaaaagaaa
tgggtccgtgcacagttcaatgctttgcaagaatgttacttgcaaaagcgtcgaaattgg
gttagacaagcatgtaaagaggaaaagagggatgcagatacttcaaatagagaaggatac
aatccaggccttgaggatttccattctgtgctaaccaatttcactcgatgcagtcaattt
agggttgtcgctgaacttagacaaggtggccttttccactctgctaacatcgtgtccagt
atagaatttgatcgtgatgatgaactgtttgctactgctggagtttataggcgcattaag
atttttgagttttccaaagtcatgaatgaaccggaagatgtgcattgtcctgttgtcgaa
atgtccacgcgatctaaactcagttgcgtgagctggaacaagtatatgaaaaatcatatt
gctagcagtgattatgaggggatagtaactgtgtgggatgtaacaactcgccagagcata
atggagtatgacgagcacgaaaagcgagcttggagtgttgatttttcacagaatgaacct
tcaatgcttgtatctgggagcgatgactgcaaggtcaaaatttggagcacaaagcaagag
tcaagtgttctcaacattgatatgaaagcaaatgtctgttctgtcaagtataatcctgga
tccagcattcatgtggcggtgggatctgctgatcatcatattcactattatgacttgaga
aacattagccaaccactttatgtgtttagtgggcatcggaaaactgtttcatatgtgaaa
tttctatctagtaacgtgctggcttctgcatctactgacagcacattgcgcttatgggac
gtgaaggaaaatctagcactgcgtacatttagaggccatacgaatgagaaaaactttgtg
ggtcttgcggtgaataatgaatacattgcttgcggcagcgaaacgaatgaagtgtttgtg
tatcacaaggctatctctaaacctgcagcttcgcatagatttagtatagatttggagaat
ggtggcgatgatgctggatcatacttcactagtgctgtgtgttggaagagtgatagccct
acaatgctagctgcaaataatcaaggaaccattaaagtgcttgttcttgctgcttga
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