Populus euphratica (Euphrates poplar): 105108245
Help
Entry
105108245 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105108245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105108245
03009 Ribosome biogenesis [BR:
peu03009
]
105108245
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105108245
Spliceosome [BR:
peu03041
]
Complex A
U1 snRNP components
U1 related factors
105108245
Complex B
105108245
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105108245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105108245
NCBI-ProteinID:
XP_011000790
UniProt:
A0AAJ6SYN6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSGSGFGGASSYGGSSTRPSSERREYGRGDSPAKSDLDGLTPF
EKNFHVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFHDVGFPDYVLQEISKAGF
TEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIIHVNAQPFLAPGDGPIVLVLA
PTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES
HHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQSL
YNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ
ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINY
DFPGSIEDYVHRIGRTGRAGAKGTAYTFFTAGNARFAKELVTILEEAGQKVSPELTAMAR
GAPPLLSGHGGFRDRGRGYSGGRSWS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagccgatacgacagccgctccggcgacccaacttcttaccgtgacaggagaagtggt
tcaggtttcggcggcgcttccagttatggtggtagctccactcggccatcatccgagagg
agggagtatggtcgtggtgactcgcctgcgaagtcggatttagatgggctgactccattt
gagaagaatttccatgtggaatccccatcagtggcagcaatgtcagaaagggaggtggag
gagtataggcaacgcagggagattactgtagagggccgtgatgttcccaagcctgtgaag
agttttcatgatgtcggctttccagattatgttctgcaagaaatctcaaaagctgggttt
actgaacctacacctatacaagctcaaggatggccaatggctttgaagggccgtgatctc
attggtattgctgaaacaggatctgggaagacactggcttacctattgcctgcaattatc
catgttaatgcccaaccatttttagctcctggagatggacctattgtattagttttagct
ccaacacgtgaacttgctgttcagatacaacaagaagcagctaaatttggtgcatcatca
aggattaaaaatacatgcatatatggtggggttccaaagggacctcaagtgcgtgacctc
cagaaaggtgttgaaattgtcattgctacacctggaaggttgattgatatgatggagtca
catcatacaaatttgcgaagggttacttatctggttctggatgaagcagatcggatgtta
gacatggggtttgagcctcagatacgaaaaattgtttctcagattcgaccagatcgtcaa
actttgtactggagtgcaacctggcctaaagaggttgaacaactggcacggcagtctctt
tacaatccatacaaagtgataataggatctccagatttaaaagctaatcatgcaatacgt
caacatgtggacattgtttcggagaatcagaaatataacaaattggtgaagttgctggaa
gatatcatggatggtagtcgtattctgatttttatggataccaagaaaggttgtgatcag
atcactcgacaacttcgcatggatggttggcctgctctctcaattcatggagataaaagt
caagcagaaagagactgggtcctgtctgagttcaaagctggcaagagtcctataatgact
gcaacagatgttgctgctcgtggattagatgtgaaggatgttaaatatgtgatcaattat
gacttccctgggtccatagaggattatgttcaccgcattggccggacaggaagggcagga
gcaaaaggaacagcttacactttcttcacagctgggaatgccagatttgctaaagaactt
gtcaccatactcgaggaagctggacagaaggtcagtccagaattgacagcaatggctcgt
ggtgcacctcctctactatctggccatgggggtttccgagatcgggggaggggttacagt
ggtggccggtcttggagctaa
DBGET
integrated database retrieval system
