Populus euphratica (Euphrates poplar): 105108249
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Entry
105108249 CDS
T05872
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
peu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105108249
03083 Polycomb repressive complex
105108249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105108249
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105108249
Histone modification proteins
HAT complexes
HATB complex
105108249
HDAC complexes
Sin3A-HDAC complex
105108249
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105108249
PRC2.2
105108249
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105108249
Heterochromatin formation proteins
Other heterochromatin formation proteins
105108249
Chromatin remodeling factors
NuRD complex
105108249
NuRF complex
105108249
NuRF complex (fruit fly)
105108249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105108249
NCBI-ProteinID:
XP_011000795
UniProt:
A0AAJ6SY31
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGVNERYTQWKTLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTNIVA
THTDSPDVLIWDVDSQPNRHAVLGATESCPDLILTGHKDDAEFALAMCPTEPFVLSGGKD
KLVVLWSIQDHISTLAAEPGLSKSPGSGSFPNKSASKAGGGNDKRTKSPSIGPRDVYQGH
TDTVEDVQFCPSSAQEFCSVGDDSCLVLWDARAGCTPVVKVEKAHNADLHCVDWNPHDVN
LILTGSADNSVHMFDRRNLNLGGVGAPVHKFEGHNAAVLCVQWSPDKSSVFGTSAEDGIL
NIWDYEKIGKKQDFTGLKVPTAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDGEST
GGGGTLQIWRMIDLIHRAEEDVLVELENFKSHILACERSQGS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaacgagagatacacacaatggaagactttggtccctgtcctctacgattgg
ctcgctaatcacaacctcgtctggccctctctttcttgccgatggggtccacagcttgag
caagctacttacaagaatcgtcagcgcttgtacctctctgaacagacagatggcagtgtt
ccaaatactctggtcattgctaactgcgaagttgttaaaccaagggttgcagctgcagaa
cacatatcacagttcaatgaggaagcgcgctctccctttgtaaagaagtacaaaactatc
atacaccctggcgaggtgaacagaatcagggaactcccacagaacaccaacattgtggct
acacacaccgatagtcctgatgttctcatttgggatgttgattctcaacctaatcgtcat
gctgtcctgggagctacagagtcttgtccggatctgatattgactggccataaagacgat
gctgaattcgctcttgctatgtgtccaactgagccctttgtgctctctggaggtaaggac
aagttggtggtcttgtggagtattcaggaccatatttcaactttggcggcagagccaggg
ttgtcaaaatctcctggatctggtagcttccctaataaatccgcctctaaggcaggtgga
ggtaatgacaaacgtacaaagagtccttccattggaccacgggatgtctaccaagggcat
acagatactgttgaagatgttcaattctgcccatcaagtgcacaggagttttgcagtgtg
ggtgatgattcttgccttgtattatgggatgcaagagctggctgtactccagttgtcaag
gttgagaaagctcacaatgctgatcttcattgtgttgattggaatcctcatgatgtgaat
ctcattctgacagggtctgctgataattctgttcacatgtttgatcgtcggaacctcaat
cttggaggggtaggagcacctgttcacaagtttgagggtcataatgctgcggtcctctgt
gtacagtggtctccagataaatcgtctgtctttggcacttctgcagaggatggcattcta
aatatatgggattacgaaaagattggtaaaaaacaagactttactgggctgaaagtgcca
actgctcctcctggattatttttccggcatgctggccatcgggataaggttgttgacttc
cactggaatgcatccgatccatggacaattgtcagtgtgtctgacgatggtgaaagtaca
ggaggaggtggcactctacagatatggcgaatgattgatttgattcacagggccgaggag
gatgtcttggttgagcttgagaatttcaaatctcacatcctcgcatgtgaaagaagtcag
ggctcctag
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integrated database retrieval system
