Populus euphratica (Euphrates poplar): 105108264
Help
Entry
105108264 CDS
T05872
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105108264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105108264
Enzymes [BR:
peu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105108264
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
105108264
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
105108264
NCBI-ProteinID:
XP_011000814
UniProt:
A0AAJ6X0G9
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MEIDSAVEQPPPQQPITSATATDGVNQTQSPSGSMGKEESDGVKTVSLLSAARFDDDEEE
EDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVY
AENAPARLPFQEFVVGMTMKTCHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSLGE
AQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQDAEREDEGD
RNGARAARRPPGQVNRNVAGEVNAEDAGGAQGIAGGGQIIRRNAENVAARWEMQAARLEA
HVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGR
IILYYISWLFSSASVPVLSTVMPLTDTALSLANITLKNALTAVANLTSEGEDGGVLGQVA
DMLNVNASGLNEVSNNISSPLSADLLKGASVGTSRLSDVTTLAIGYMFIFSLVFFYLGGV
ALIRYTKGEPLTTGRFYGIASIAETIPSLFRQFLAATRHLMTMIKVAFLLVIELGVFPLM
CGWWLDICTIRMFGKSMAQRVQFFSISPLASSLVHWVVGIVYMLQISIFVSLLRGVLRHG
VLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSI
FPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLL
AGAEDNGGQDNGNVEQGRQDRLQAAQQGGQDRALVALAAADDQNSSTLAAGTSAEEDEID
EQSDSDRYSFVLRIVLLLVVAWMTLLMFNSTLIVVPISLGRALFNAIPLLPITHGIKCND
LYAFVIGSYVIWTALAGARYSVEQIRTKRATVLFSQIWKWCSIVLKSSALLSIWIFVIPV
LIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDQMMPLVDESWRIK
FERVREDGFSRLQGLWVLQEIVFPIIMKLLTALCVPYVLSRGVFPVLGYPLAVNSAVYRF
AWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEYKEKQQNEAGTSSEA
QISNSQGTGLIGEVEVGGIRLRRPIREEA
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgactccgctgtggaacaaccaccaccacaacagccgatcacctccgcaacg
gccaccgacggcgtaaaccagacgcagtctccatcgggttcgatggggaaagaggagagt
gacggggtaaagacggtgtcgttgttgtcggcggcgaggttcgatgacgacgaggaagag
gaggatgtttgcaggatctgtagaaatccaggagatgcggagaatccgttacggtatccg
tgcgcatgtagtggaagtattaagtttgttcatcaggattgtctccttcagtggcttaat
catagtaatgctcgccagtgcgaggtttgcaaacatcctttttctttctctcctgtttat
gctgagaatgccccagctaggcttccttttcaggagtttgtagtagggatgacaatgaag
acttgtcatgttctacaattctttttgcgtcttagttttgtgctttcagtttggcttcta
attataccctttattacgttttggatatggcgcttggcttttgtgaggagtttaggtgaa
gcccagagattattcttaagtcacatctccactactgttattcttactgattgtctgcat
gggttcctgctttctgcgagtattgttttcatttttcttggcgccacttctctgagagat
tacttcaggcatttaagagagcttggaggacaggatgctgagagagaagatgaaggagac
agaaacggtgcccgagctgcaagacgaccaccaggacaggtcaatagaaatgttgctggt
gaggtaaatgctgaagatgctggtggagcacaaggaattgctgggggtggtcaaataatc
cgaaggaatgcggagaatgttgctgctcgatgggagatgcaggcagctcgtctcgaggct
catgttgaacagatgtttgatggtttagatgatgctgatggtgcagaggatgtgcccttt
gatgagctcgttggcatgcagggtcctgtttttcatttagttgaaaatgcatttactgtt
ttggctagcaatatgatattcctcggtgttgtaatctttgtgccattttctctgggacgg
attatactgtactacatatcatggcttttctcttctgcaagtgttcctgtgctgtcaaca
gttatgccacttacagatactgctctctccttagcaaatatcaccttgaagaatgcatta
actgctgttgcaaatttgacatctgaaggtgaagatggtggagttctcggtcaggttgcg
gacatgttgaatgtaaatgccagtggactaaatgaagtctcaaataacataagcagtcca
ctttctgcagatctcttaaaaggggcaagtgttggcacgtcacggctttctgatgtcacg
actcttgccattggatacatgtttatattctctctagtcttcttctatcttggcggtgtt
gctttaattcggtacactaagggtgaacctttgaccacggggaggttttacggtattgct
tctatagcagagacaattccatccctcttcaggcaattcttggcagcaacgagacatttg
atgaccatgattaaggttgccttccttctagttattgaactcggggtgttccctttgatg
tgtggatggtggctggatatttgtacaataaggatgtttggaaagtctatggctcaaaga
gttcagttcttctcaatttctcctttagcaagctcgttagttcattgggttgtaggaatt
gtttacatgctacaaatcagcatcttcgtgagccttcttcgtggggttttgcgccatggt
gtcttgtattttcttcgagatccagcagatcctaactacaacccgttccgtgatttaatt
gatgatcctgtgcacaagcatgctcgcagagttttattgtctgttgctgtttatggaagt
ctaattgtgatgcttgtattcttacctgttaaacttgctatgagaatggcaccttccatt
tttccactggacatttcggtatccgatccattcactgaaattccagctgacatgcttctc
tttcaaatctgcatcccatttgccattgagcattttaagttgcggaccacaatcaagtcc
cttctccgttactggtttacagcagtaggctgggcacttggcttaacagatttcttactg
gctggagctgaggacaatggtggtcaagacaatggaaatgtggagcaaggaaggcaggat
agactacaggctgcacaacaaggtggacaagacagggccctagtggctcttgcagctgca
gatgaccaaaacagttccactcttgcagctggaacttctgcagaggaggatgagattgat
gagcaatctgattcagataggtacagctttgttctacggattgtcctcttgctggtggtg
gcatggatgacgctacttatgttcaactccacgttgatagttgttccaatatcacttggg
cgtgctcttttcaatgccattcctcttctgccaataactcatggcatcaagtgcaatgat
ctatatgcttttgtaattggaagttacgtcatttggactgctttagctggagcaagatac
tctgttgagcaaattagaacaaagagggcaacagttttgtttagccaaatctggaagtgg
tgcagcattgttctcaagagctcggctctgttgtcaatatggatttttgttattccagtg
ttgattgggctgctcttcgagcttttggtaattgtgcctatgcgggtgcctgtagatgaa
agccctgttttccttctgtatcaggattgggcattagggctcatctttctcaagatatgg
actcggctggtaatgttggaccagatgatgccgctggtggatgaaagttggagaataaaa
ttcgaaagggtgagagaagatggtttctcaaggctgcaaggcctttgggtactgcaggag
attgttttcccaataataatgaagctgctaacagccttgtgtgtaccttatgtcttatca
agaggagtatttcctgttcttgggtacccattagcagtaaactcagcagtgtaccgattt
gcatggctgggatgcctctgcttcagcctgttgtgcttttgtgccaagagatttcatgtc
tggttcaccaaccttcacaattccattcgtgatgatcgctatctcattggtcgcaggctt
cataactacggagagtataaagagaagcagcaaaatgaggcagggacttcctcagaagca
cagatttcaaattctcagggcacgggtttgattggagaagttgaagtaggaggaataaga
ttaagacgtcctattcgagaggaagcttaa
DBGET
integrated database retrieval system
