Populus euphratica (Euphrates poplar): 105108510
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Entry
105108510 CDS
T05872
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105108510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
peu04121
]
105108510
Ubiquitin system [BR:
peu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105108510
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
Motif
Other DBs
NCBI-GeneID:
105108510
NCBI-ProteinID:
XP_011001141
UniProt:
A0AAJ6X0R3
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MGPNPKMKREFLDSTRSSPFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPIIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFATKYPFLEE
LRLKRMAVSDESLEFLAVNFPNFKVLSLLSCDGFSTDGLAAIATHCKSLTQLDIQENGID
DKSGGWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKVNKSISLEHLQR
LLVCAPQLTELGTGSFTPELTTRQYAELESAFNQCKNLNTLSGLWEATALYLPVLYPVCS
NLTFLNLSYTFLQSLELASLLRQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEIIHGVTEAGFVAVTYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSS
DRGMQCVLEGCPKLRKLEIRDCPFGNVALLSGLEKYESMRSLWMSACNVTMNGCLLLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVAGPRRDAPPCVLTLSGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaatccaaagatgaaaagggaatttcttgactcaacaaggtcatcaccattc
ccagatgaagtactggaacgagttctttcactcttgaaatcacacaaagatcgtagcgca
gtgtctctagtatgcaaggactggtacaacgctgaaagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgttgcacgtagatttccaataattaag
agtgttactcttaaagggaagccaagattttctgattttaatctagtgcctgaaaattgg
ggagctgatgttcatccttggcttgtagtttttgcaactaagtatccgtttttggaagag
ctgaggcttaagagaatggctgttagtgatgaaagtttggagtttttggctgttaatttt
cctaattttaaggttctttctctgttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagagtctgactcagcttgacatacaagagaatggcattgat
gacaagagtggtggttggttaagctgcttccctgaaaacttcacatcattggaagtacta
aactttgccaatctgaatactgatgtcaatttcgatgcacttgagagacttgtaagtagg
tgcaagtcactgaaggttctgaaggtcaacaaaagtatttccttggaacacctacaaagg
ctgctagtttgtgctccacaattaacagagcttggtactggttcattcacaccagagctt
acaactcgtcaatatgcggagcttgaaagtgcatttaaccagtgcaagaatttaaatacc
ctttcgggtttatgggaggcaacagcattatatctaccagttctgtaccctgtctgttca
aacttgactttcttaaacctgagctatacttttctgcaaagtcttgaacttgcaagtctt
ctccgtcaatgtccacgacttagacgcctctgggtcctggacactgtgggggacaaaggg
ctggaggctgttggatccaactgtccattgcttgaggagctccgtgtcttccctgctgat
ccctttgatgaggaaattatccacggggtgactgaagcagggtttgttgctgtcacttat
ggatgtcgaagactccactatgttctctacttttgccggcagatgactaatgctgcagta
gcaaccattgtgcagaactgccctgatttcacccactttcgcctttgcataatgaatcca
ggccaaccggattacttgacaaatgaacctatggacgaggcttttggggcagtggtgagg
acttgcactaaactacagaggctttctgtttcaggtctcttgacagacctgacatttgaa
tatattgggcagtatgccaaaaatctggaaactctgtctgtggcttttgcgggcagtagt
gatagggggatgcaatgtgtgctagaaggttgtccaaagttgaggaaacttgagataagg
gactgcccatttggaaatgtagcacttctttcaggtttggagaaatacgagtcaatgagg
tcactttggatgtcagcctgcaatgtgacaatgaatggctgtctgttattggcaagggag
atgcccagattgaatgttgaagtaatgaaagaggatggaagtgatgactctcaggctgat
aaagtttatgtttaccgttccgttgcggggccaagaagagatgctccaccttgtgtactc
actctctcaggtttataa
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