KEGG   Populus euphratica (Euphrates poplar): 105108810
Entry
105108810         CDS       T05872                                 
Name
(RefSeq) THO complex subunit 4C-like
  KO
K12881  THO complex subunit 4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03013  Nucleocytoplasmic transport
peu03015  mRNA surveillance pathway
peu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105108810
  09122 Translation
   03013 Nucleocytoplasmic transport
    105108810
   03015 mRNA surveillance pathway
    105108810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:peu03019]
    105108810
   03041 Spliceosome [BR:peu03041]
    105108810
Messenger RNA biogenesis [BR:peu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105108810
    TREX complex
     105108810
Spliceosome [BR:peu03041]
 Complex C
  Other components
   EJC/TREX
    105108810
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105108810
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_11 RRM_10
Other DBs
NCBI-GeneID: 105108810
NCBI-ProteinID: XP_011001571
UniProt: A0AAJ6SYT8
LinkDB
Position
Unknown
AA seq 274 aa
MAATVDMSLDDIIKKNRERGRGRGRASRGRGHGPVRSFNNGRMSGAVRRGPLSVNTWPSK
YSIAKPSRRVRSLPWQHDLLKDSIRAAGITGVEVGTKLYVSNLDYGVTNEDIRELFAEVG
DLKRYAVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIEIVGPNPVVPIS
ARMNVTGANGKKKRTVFTTPGLGGGRGAGANNRGSGQSRRGGGDLRNGTRNGRGQAPGRG
RASGQGRGKKQPVEKSVDELDKELESYHAEAMQT
NT seq 825 nt   +upstreamnt  +downstreamnt
atggctgcaactgtggatatgtctcttgatgacattataaagaaaaacagggagagaggt
agaggacgaggtagggccagccgtggacgtggccatggacctgttaggtcctttaataat
ggaaggatgtcaggggctgttcgtagaggccctctctcagtgaatacttggccatcaaaa
tactccattgctaagccttctcgcagagttaggagtttgccttggcagcatgatttgctt
aaggatagcattagagctgctggaataacaggagtagaagttggaaccaagttatatgtt
tcaaacttggattatggggtgaccaacgaagacataagggagctcttcgcagaggttgga
gacctgaaacgatatgctgttcactatgacaaagatggtcgctctagtggctcagctgaa
gttatgtatacaagaagaagcgatgcatttgctgctcttaagaagtataacaatgttctg
ttagatggaaagcccatgaagattgagattgtgggtcctaatccagtggtgcctatttca
gctcgaatgaatgttactggagcaaatggaaagaagaagagaactgtttttacgacacct
ggactaggtggtggaagaggtgctggtgcaaataatcgtggttctggtcagagtcgtcga
ggaggtggggatctaaggaatggtacgaggaatggccgtggtcaagctcctggccgtggt
cgtgcttctggacaaggccgtgggaagaagcaacctgttgaaaagtcagtagatgagctg
gacaaggaattggaaagttaccatgctgaagccatgcaaacttaa

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