Populus euphratica (Euphrates poplar): 105108810
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Entry
105108810 CDS
T05872
Name
(RefSeq) THO complex subunit 4C-like
KO
K12881
THO complex subunit 4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105108810
09122 Translation
03013 Nucleocytoplasmic transport
105108810
03015 mRNA surveillance pathway
105108810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105108810
03041 Spliceosome [BR:
peu03041
]
105108810
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105108810
TREX complex
105108810
Spliceosome [BR:
peu03041
]
Complex C
Other components
EJC/TREX
105108810
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105108810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_11
RRM_10
Motif
Other DBs
NCBI-GeneID:
105108810
NCBI-ProteinID:
XP_011001571
UniProt:
A0AAJ6SYT8
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MAATVDMSLDDIIKKNRERGRGRGRASRGRGHGPVRSFNNGRMSGAVRRGPLSVNTWPSK
YSIAKPSRRVRSLPWQHDLLKDSIRAAGITGVEVGTKLYVSNLDYGVTNEDIRELFAEVG
DLKRYAVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIEIVGPNPVVPIS
ARMNVTGANGKKKRTVFTTPGLGGGRGAGANNRGSGQSRRGGGDLRNGTRNGRGQAPGRG
RASGQGRGKKQPVEKSVDELDKELESYHAEAMQT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaactgtggatatgtctcttgatgacattataaagaaaaacagggagagaggt
agaggacgaggtagggccagccgtggacgtggccatggacctgttaggtcctttaataat
ggaaggatgtcaggggctgttcgtagaggccctctctcagtgaatacttggccatcaaaa
tactccattgctaagccttctcgcagagttaggagtttgccttggcagcatgatttgctt
aaggatagcattagagctgctggaataacaggagtagaagttggaaccaagttatatgtt
tcaaacttggattatggggtgaccaacgaagacataagggagctcttcgcagaggttgga
gacctgaaacgatatgctgttcactatgacaaagatggtcgctctagtggctcagctgaa
gttatgtatacaagaagaagcgatgcatttgctgctcttaagaagtataacaatgttctg
ttagatggaaagcccatgaagattgagattgtgggtcctaatccagtggtgcctatttca
gctcgaatgaatgttactggagcaaatggaaagaagaagagaactgtttttacgacacct
ggactaggtggtggaagaggtgctggtgcaaataatcgtggttctggtcagagtcgtcga
ggaggtggggatctaaggaatggtacgaggaatggccgtggtcaagctcctggccgtggt
cgtgcttctggacaaggccgtgggaagaagcaacctgttgaaaagtcagtagatgagctg
gacaaggaattggaaagttaccatgctgaagccatgcaaacttaa
DBGET
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