Populus euphratica (Euphrates poplar): 105109030
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Entry
105109030 CDS
T05872
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105109030
Transcription machinery [BR:
peu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105109030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
105109030
NCBI-ProteinID:
XP_011001910
UniProt:
A0AAJ6SZP6
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSSNPSFVAPHEQIPLPIETT
KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGV
IRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVTSAGKR
KDRKNENEKIDELLREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKE
HLQENLGREPTDVELAKATTMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFA
NGTKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLE
SIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTTQEE
FIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNL
NISREMVRKHEVKALMKLKHPTRVDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaagtgtttcgagctcagcttctcggacaccactaggattgagcacaaag
ttttcaacttacggatctacagcaaaaaggcctttgattgtagcatttaaagccgacaaa
tccagcaacccatctttcgtcgcaccacatgagcaaattccattgcccatagaaacaacg
aaggggaagaagagacttggaaaaagcaaaaaatcttctaatagattaaaagctgtccgt
actgaagtttctccgtgtacattgttagtggattacaatgaagctgctgcgaaacttgaa
aacatatacaagcttagccctggaactgatacctctgatgtggaagacgcaagtggtgtg
attaggagaggtaggcaaaggaaaaggaaaattagtgaaggtgacaaagaagccgaggat
agaactagtaaaatcattgttaggaaccgggcaaagaaggctaaacgattgagccttgag
aaaaggatttctctgaggatcaagaatgaagagaaattggtgacttcagctgggaagaga
aaagatcgaaaaaatgaaaatgaaaagattgatgagcttctgagggagtattcggcttca
actgatttggtcagcttggactggaaaaaaatgaagatacctccggtccttacttcatca
gagcatgtctggttatttaagttgatgcagcctatgaaagcactccttcaagtgaaagag
catctgcaagaaaatctggggagagaaccaactgacgttgaattagctaaagcaacaact
atggatgtgctccaagtaagaaagcaaatagcagttggtcgagctgcaaggaacaagctc
attaagcacaatcttcggcttgtattgtttgtgatcaaaaaatattttcaagactttgca
aatgggacaaaatttcaagatctttgtcaggcgggagtgaagggacttattacagcaatt
gatcgctttgaacccaaaaggagattccggctctccacttatgggctattttggattaga
catgccatcatacgatcaatgacactctcaagctttacacgcgtttcgtttggcctggaa
tcgattaggtctgaaatccagaaagcaaaacttgaattgtggtttcaacttaaaagacaa
ccaatggaggatgagattattgaaaaagttcggatctcccctgagaggtaccatgaagtg
acgagggcctcaaaacctgttttgtctctccattcaagacacaaaacaacgcaggaagag
tttattggtggaattgctgatgttgatggaggtgatgaccggaggcagtcagctcttctc
aggcttgcacttgacgatgtgcttgattctctaaaaccaaaggagagcttagtggtccga
cagagatacgggcttgatggtaaaggagatagaacattaggagagattgctgggaactta
aatatctccagagaaatggtcaggaagcacgaagtaaaagcactcatgaagctcaaacat
ccaactagagtggattatcttcgccgctatgttgtctga
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