Populus euphratica (Euphrates poplar): 105109224
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Entry
105109224 CDS
T05872
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105109224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105109224
03110 Chaperones and folding catalysts [BR:
peu03110
]
105109224
03029 Mitochondrial biogenesis [BR:
peu03029
]
105109224
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105109224
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105109224
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105109224
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP60 / Chaperonin
105109224
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105109224
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105109224
Exosomal proteins of other body fluids (saliva and urine)
105109224
Exosomal proteins of breast cancer cells
105109224
Exosomal proteins of colorectal cancer cells
105109224
Exosomal proteins of bladder cancer cells
105109224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
105109224
NCBI-ProteinID:
XP_011002149
UniProt:
A0AAJ6X1Q6
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MHRFTSSLASKARIVRSKTNQIGSRLSWSRNYAAKDIRFGVEARSGMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDTAGDGT
TCATVLTQAIFTEGCKSVAAGMNAMDLRRGISMAVESVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLSNELEVVEGMKLDRGYISPYFITDQK
TQKCELDDPLILIHDKKVSSLHAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCSIKAPGFGENRKAILQDLAALTGGEVITEELGLNLENVDLDMLGSCKKVTVSKDD
TVILDGAGDKKSIEERCEQIRSAIEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAEGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVTDLPKDVKDAPAMGPGMGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcacctcgagcctcgcttctaaagctcggattgttaggagcaaaaccaat
cagattggaagtaggttgagttggagcagaaactatgctgccaaagacataagattcggt
gtggaggctcgttctgggatgctcaagggtgttgaagagctagctgatgctgtcaaagtc
accatgggccctaagggtcgcaatgtggttattgaacaaagctttggtgcccctaaagtg
acaaaagatggcgtgactgttgctaaaagcattgaattcaaggataaagtcaagaatgtt
ggtgctagcctggtgaagcaggttgcaaatgccaccaacgacactgcaggcgatgggacc
acttgtgctacggttctcactcaagcaatatttactgaaggatgcaaatcagttgctgct
ggaatgaatgcaatggacctaagacgtggtatcagcatggcagttgaatcagttgttacc
aatttgaagagcagagcaagaatgatcagcacatctgaagaaattgcacaagttggtaca
atatcagcaaatggggagagggaaattggtgaattgatagcaaaggccatggagaaggtt
ggcaaagagggagttataacaattcaagatgggaaaacattatctaatgagttggaagtt
gtcgaggggatgaagcttgacaggggctatatatccccttatttcatcacggaccagaaa
acccaaaaatgtgaattagatgatcctctcattctgatccatgacaagaaagtctcaagt
ttgcatgctgtggtgaaagtactagagttggctttaaagagacaaaggcccttgctgatt
gttgctgaagatgtggaaagcgaggccttggcaactcttattttaaataagcttcgtgct
ggaatcaaggtctgttccattaaggcccctggttttggagagaacaggaaggccatattg
caggatctggctgccctcacaggaggcgaagttataactgaagagcttggcctcaatctt
gaaaatgtggatttggatatgcttggcagttgcaaaaaggttacagtatcaaaggatgac
acagttattcttgatggtgctggagataagaagtccattgaagaaagatgtgaacagatc
cgatctgcaatagaagcaagcacttctgactatgacaaagagaagttgcaagaaagattg
gcgaagctttctggtggtgttgctgtgctgaagattggaggagctagtgaagctgaagtc
agtgagaagaaagacagagttacagatgccctaaatgccacaaaggctgctgtagaagag
ggtattgtgccaggtggtggcgctgctcttctttatgcatcaaaagagttggataagctt
cagactgcaaactttgaccagaagattggtgttcaaattatccagaatgccctgaagact
cctgtgcatacaattgctagtaatgcgggagttgagggagctgttgttgttggtaagcta
ttggagcaggacaaccctgatctcgggtatgatgctgccgaaggtgaatatgttgatatg
gtgaaagctggaattattgacccattgaaagtaattagaactgctttggtcgatgctgcc
agtgtctcgtcgttgatgacaacaactgaggctgttgtaactgatcttccaaaggatgta
aaggatgctccagcaatgggtccaggcatgggcatggattattga
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