Populus euphratica (Euphrates poplar): 105109361
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Entry
105109361 CDS
T05872
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105109361
03400 DNA repair and recombination proteins [BR:
peu03400
]
105109361
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105109361
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
105109361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
105109361
NCBI-ProteinID:
XP_011002358
UniProt:
A0AAJ6T0H4
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MEEEKKLEEKLKEVGSKLETLPSTKDGVIKLLKQAAACLSEMDQSPLVSVSESTQPFLDA
IVKPDLLKHQDRDVKLLVATCICEITRITAPEAPYSDEVLKDIFHLIVGTFSGLSDTGSP
SFGRRVVILETLAKYRSCVVMLDLECNDLVNKMCSTFFTVASDDHQESVLSSMQTIVVVL
IEESEDIREDLLLIILSVLGRNRNDISMAGRKLALNVIEHCAGKLEAGIKQFLISSMSED
SRLENCKIDYHEVIYDIYRCAPQILSGAIPYLTGELLTDQLDTRLKAVGLVGDLFALPGS
AITETFQSIFSEFLKRLSDRVVAVRMCVLERVKSCLLSNPFRAEAAQIISALCDRLLDYD
ENVRKQVVDVLCDVACHALNSVPVETIKLVAERLRDKSQLVKRYTMERLAEIFRVYCVKS
SDGSVNPGEFDWIPGRILRCLYDKDFRSDTIEFVLCGSLFPTECAAEDRSKHWVRVFSVL
DKVEVKALEKILEQKQRLQQEILRYLSLRQMRQDGDTPEIQKKILFCFRIMSRSFAEPAK
AEENFHIVDQLKDANIWKILTNLLDPSTSFHQACTGRDDLLKILGDKHRLHDFLSSLSMK
CSYLLFNKEHVKEIILDVNKHNSAGNMNFTKSCLDLLVILARFSPLLLGGSGEELINFLK
DDNEIIKEGALHVLAKAGGMIREQLAESSSSIDLMLERLCLEGSRRQAKYAVHALAAITK
DDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRENEIEEFIKSKILER
SSKPEDNTKACWDDRSELCLLKVYGLKTLVKSYLPVKDVQLRRGIDDLLEILRNVLMFGE
ISKDIESSSVDKAHLRFASAKAVLRLSKHWDQKIPLDLFHLTLRTPEIAFPQARKLFLGK
VHQYIKDRVLDAKYACAFLFNTTGSKSLDFDEEKQNLADIIQMHQQARTRQVSVQSDANA
SAVYPEYIIPYLVHALAHQSCPNVNECKDVKAFEPIYRQLYLIVSMLVHKDEGVKLEAGT
DKEKEKEKEKDNDKDKETNSLIVSIFQNIKCSEDVVDREKSKNSHAISELGLSIIKRLVQ
KEDESVLPSVSLPPMLYKTYEYKEGEEALANEGKVWLADESVLTHFESLKFETDGNASAH
AARDEDVNDSEREANEVPLGKMIKQLKSQGNKGGKTKKNSTSLAKAKDAENDVDILKMVR
EINLDNLGLSNKFESSNGHKELSEKTKSESEHQKVKKGNITVTPVPVPKRRRSLSAHSAS
RLPRSSLMAPSRASEDDSSPDLKGKKLKAERTGSELLVYSIQKKKNVTSKLKGKNSELGD
NGRENEVGESDDDIPVKPGMLMETDKINTTNSPQSLTSSMKKRKRRSVAGLAKCPTKKSG
IDIEDIIGYRIKVWWPMDKKFYGGTIKSYDPLKRKHVILYDDGDIEVLRLDKERWELVDN
GPKRTKKSISFKRTPSKDMSPAPKNRSPSSLSQNKKSVTIVKKKRTPTKNSKRVYKEPKD
NVDSDASSPEHAVASEGDKLKLDDPKGDHAEKVSQGMTDGEESDKEVVSISKGKHLEDTE
ERSNNSEESDGEEKSNFEAEVSEDMESTPQDDKKGDDGEESHSEEKEVDESSEALGVKAK
KEKSDSEGNQDVDIRKPSRKPKKLSKKSSNAEDADISDDEPLSKWMHKTGNTASRR
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaaaagaagcttgaagagaagttaaaggaggtgggatccaagctggaaaca
cttccttctactaaagatggtgttattaagcttttaaagcaagctgctgcttgtctttct
gagatggaccaatcaccgctggtttcagtgtcagagtcaacgcagccgtttcttgatgca
attgtaaagccagatttgttaaagcatcaagatagggatgttaagcttctagttgcaacc
tgtatttgcgagataacccggataactgcacctgaagctccttacagtgatgaagtttta
aaggatattttccacttgatcgtaggcactttcagtgggttaagtgatactggcagtcca
tcatttggaaggagagttgttattttggagactcttgccaaatataggtcatgtgttgtg
atgctggatcttgaatgtaatgatctggtgaataagatgtgcagtacattttttactgtc
gccagtgatgatcatcaagaaagtgtattatcttcaatgcaaacaatagtggttgttctc
atagaagaaagtgaggatatccgagaggatcttctacttattatcttatctgtattaggt
cgtaacagaaatgatatctcgatggcagggaggaaacttgccttgaatgttatagagcat
tgtgcaggaaaacttgaagctggcataaagcagttcctcatatcatcaatgtcagaagat
agcaggttggaaaattgtaaaatcgactaccatgaagttatatatgatatttaccgttgc
gctcctcagatcctatcaggagccattccatacctcacaggagagctgctgactgaccag
ctagacactcgtttaaaagcagtggggttggttggggatctatttgctttgcctggctct
gccatcacagaaacattccagtctatcttttccgagtttttgaaaagattgagtgataga
gtagttgctgttcggatgtgtgtccttgaacgtgtcaaaagctgtcttttgtcaaatcct
tttcgagctgaggcagctcaaatcatctctgccctttgtgaccgactgttggactatgat
gaaaatgttcgaaagcaagtcgttgatgtactctgtgatgtagcatgtcatgccttgaat
tctgtccctgttgaaactataaaactagtggcagagcgtcttcgagataaatctcaactt
gttaaaagatatactatggagagactggctgagatattcagggtttattgtgtaaagtcc
tctgatggatcagtcaatcctggtgaatttgattggattcctggaaggattttgagatgt
ttgtatgacaaggatttcagatcagatacaattgaatttgttctttgtgggtctctgttt
ccaactgaatgtgcagcagaagatagaagtaaacattgggtaagagtcttctctgtatta
gacaaagttgaggtgaaagctcttgagaagatcctggagcagaagcaaaggttacagcaa
gagattttgaggtatctatcacttaggcagatgcgtcaggatggtgatactcctgagatc
caaaaaaagattctgttctgctttcggattatgtctcgctcctttgcagagcctgccaag
gctgaggaaaattttcatatagttgatcaattgaaagatgccaatatctggaagatttta
acaaatctactcgatccaagcactagcttccatcaagcttgcactggtcgggatgattta
cttaaaatacttggcgacaaacaccgactccatgattttttgagcagtctttccatgaag
tgttcttatttacttttcaacaaggagcatgtgaaagaaatcattttggatgtcaacaaa
cataattcagctggaaatatgaattttacaaaatcttgtttggatttactggtgattctt
gcgcgcttcagtccattgttgcttggtgggtccggggaagagcttataaattttctgaaa
gatgacaatgaaataataaaagaaggtgctttgcatgttttggcaaaggctggtggtatg
atccgagaacaactagcggagtcatcaagttcaattgaccttatgttggagaggctttgc
ttagagggtagccgaaggcaggccaagtatgctgtgcatgccctagcagcaataacaaag
gatgatgggctcaaatccctctctgttttatacaagagacttgtggacatgctggaggag
aagacacatttgcctgctgtactacaatctctgggatgcattgcacagactgcaatgcca
gtttttgaaactagagaaaatgaaattgaagaattcattaagagcaaaattctagaacgc
agtagtaaaccagaagataatacaaaagcatgctgggatgacagaagtgaactatgtttg
ttgaaggtttatggactcaagacattggtcaagagctacttgccagttaaagatgtacaa
ctccgtcgtggtattgacgaccttctggaaatccttagaaacgtacttatgtttggagag
atatcgaaagatattgaatcaagttcagttgataaggcccacttgaggtttgcttctgct
aaggcagttcttcgtttgtcaaagcattgggatcaaaagatacctcttgatctattccac
ttaactttgaggacaccagagattgctttcccccaagctaggaagctgtttctgggtaaa
gttcatcaatacatcaaggaccgagttctggatgcaaagtatgcttgtgccttcttattt
aataccacaggatccaagtcccttgattttgatgaggagaagcagaaccttgctgatatt
attcagatgcaccagcaagctaggacacgacaagtctctgtgcaaagtgatgcaaatgcc
tcggcagtttatcctgaatacattatcccctatttggtccatgctcttgctcatcaatca
tgtccgaatgtaaatgagtgcaaggatgttaaagcatttgaaccaatatacaggcaatta
tacttgatcgtttctatgttagttcataaagatgaaggcgtcaagttagaagctggtacc
gacaaggagaaggagaaggagaaggagaaagacaatgacaaagacaaagagactaactct
ctaatagtttccatctttcagaatattaagtgctcggaagatgtagttgatcgagagaag
tcaaagaattcacatgctatctctgaacttgggctgtcaatcatcaagcgcttggttcaa
aaggaggatgaaagcgtgcttccatcagtttctttgcctccgatgctttacaaaacatat
gaatataaagaaggcgaagaagctctggcaaatgaagggaaagtgtggttggctgatgaa
agtgtcttgactcactttgaatcacttaagttcgagactgatggaaatgctagtgcacat
gctgccagggatgaggatgtaaatgacagtgaaagagaagctaatgaagtgcctcttggg
aaaatgatcaagcaattaaaatcccagggaaataaaggtggaaaaactaaaaagaacagc
acttcattggctaaagcaaaagatgctgaaaatgatgttgatatcttgaagatggtcagg
gagataaatttggataatctggggctatctaataaatttgagtcaagcaatggacataaa
gaactaagtgagaagacaaagtcagaatcagagcatcaaaaagtgaaaaaaggaaacatt
actgtgacacctgtgcctgtacccaaacgccgaagatcattatctgctcatagtgcttct
agattgccccgaagttctttaatggctccttcaagagcttcagaggatgattcaagccct
gatttgaagggaaaaaaactcaaagctgagcgcactggatctgaattgttggtatatagc
attcaaaagaagaaaaatgtcacatccaaacttaaaggcaaaaactccgagttgggtgac
aatggcagggaaaatgaagttggagaatctgatgatgatattccagtgaagcctgggatg
ctaatggagactgataagatcaatacaacaaatagtcctcagtctttgactagttctatg
aagaagcggaaaagaagaagtgtagcagggttggccaagtgcccaacaaagaaaagtggc
attgatatcgaggatattattggttacagaataaaagtttggtggcccatggataagaag
ttttatggaggcaccatcaagtcttatgatcctttgaaaaggaaacatgtgatattatat
gatgatggagatatagaagtactccgtttggataaagagcgctgggagctcgttgacaat
ggccccaagcgcacaaagaaatcaatttcatttaagcgcaccccttccaaggacatgtca
ccagcaccaaaaaatagaagtccaagtagtttaagtcagaataagaagtcagtgacaatt
gtgaaaaagaaaagaactccaacaaaaaactcaaagcgtgtgtataaagagccgaaggac
aatgtggattctgatgcatcaagccctgaacatgccgtggcatctgaaggagataaactc
aaattagatgatcctaaaggggatcatgctgaaaaggtgtcccagggcatgacagatggg
gaggaatctgataaggaagtggtgtcaatttccaaaggtaaacacttggaagacacagag
gaaaggtcaaataattctgaggaatctgatggagaagagaaatccaattttgaagctgaa
gtttctgaagatatggaaagcacaccacaagatgataaaaaaggtgatgacggagaggaa
tcccattcagaagagaaagaagtagatgaatcaagtgaagccttgggagtgaaagctaaa
aaagaaaaatcagattctgaagggaatcaagatgtagacatcaggaaacctagcagaaag
ccaaagaaacttagtaagaaatcatcaaatgctgaagatgccgacatctctgatgatgaa
cctcttagcaagtggatgcataaaacagggaatacagcatcaagacgttga
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integrated database retrieval system
