Populus euphratica (Euphrates poplar): 105109888
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Entry
105109888 CDS
T05872
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105109888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105109888
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105109888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
105109888
NCBI-ProteinID:
XP_011003052
UniProt:
A0AAJ6T2H5
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MILAGMEDEDKWLAEGIAGIQHNAFYMHRALDANNLRDALKCSALMLSELRTSKLSPHRY
YDLYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDALKDLVEMCHGVQNPIRGLFLRSYLAQVSRDKLPNLGSEYEGGEDTAMDAVEFVL
QNFTEMNKLWVRMQHQGPVRIREKLEKEKNELRDLVGKNLHVLSQIEGVNLEIYRDTVLP
RVLEQIVNCKDELAQYYLMDCIIQVFTDEYHLQTLETLLGACPQLQPTVDIKTVLSRLME
RLSNYAASSPDVLLEFLQVEAFAKLSSAIGKVIEAQVDMPIVEAVTLYVSLLTFTLHVHP
ERLDYVDQVLGACVKLLFGKPKLKDGRATKQIVALLSAPLEKYNDIVTALSLSNYPRVMD
CLDDVTNKVMAMVIIQSIMKSNTCISTADEIEVLFELLKGLIKGLDGTAADELDKEDFNE
EQNSVARLIHVLYNDDSEEMLKIICTVRKHIMAGGPTQLPFTVPPLIFSALRLVRKLQAQ
DGNVVGEEEPATPKKIFQLLNETIEALSSVPSPELGLRLYLQCAQAANDCDLEPIAYEFF
TQAFILYEEEVVDSKAQVTAMHLIIGALQRMNVLGVENRDTLTHKATGYSAKLLKRPDQC
RAVYACSNLFWVDEKDCIKDGERVLLCLKRALRIANAAQQMANAVTGTSGLVTLFVEILN
KYLYFFEKGNPQVTSAAIQGLVELIINEMQSDSTTPDPASEAFFASTIRYIQFQKQKVGV
VGEKFGPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccggaatggaagacgaagacaaatggctagcagaaggaatcgccggcatt
caacacaacgccttttacatgcatcgcgctttggacgccaacaatctccgagacgctctc
aaatgctcagctctaatgctatcagagctccgaacttctaaactctctccgcacagatac
tacgatctctatatgagagcgtttgatgaattgaggaaactagagatgtttttcaaagac
gagagtaggcatggcgtttcgattgttgatttatacgagctcgtgcagcatgctggcaat
atattgcctagactgtatctactgtgtacggtaggatcagtgtatatcaaatcgaaggag
gctccggctaaggatgcgcttaaggatcttgtagagatgtgtcacggtgttcaaaatccg
attcgaggattgtttttgagaagttatcttgctcaagttagcagagataaattacccaac
cttgggtccgagtatgaagggggtgaggacacagcaatggatgcagtagaatttgtgctg
caaaatttcaccgagatgaataaactttgggttcggatgcagcatcaggggcctgttagg
attagagagaagctggaaaaggaaaaaaatgagcttcgtgatcttgtagggaagaatctc
catgttcttagtcagattgagggcgtgaaccttgaaatttacagagacactgttcttccc
agagttttagagcagattgtcaactgtaaagatgagctggcgcagtattatttaatggac
tgcataattcaagtctttacagatgagtaccacttgcagacccttgagacattgttgggg
gcctgcccccagcttcagccaacagttgacattaagacagtgctatcacggttaatggaa
agattgtccaattatgctgcttcaagtccggatgttttactcgagttcctgcaagtagaa
gcttttgctaaattgagcagtgctattggaaaggtgattgaagcacaggttgacatgcct
attgttgaagccgttactttgtatgtgtctctcctcacattcacactacacgttcatcct
gaacgccttgattatgtggatcaagtactgggggcatgtgttaagctcctctttggcaag
ccaaagcttaaggatggcagagcaacaaaacaaattgttgcacttctgagtgctccatta
gaaaagtacaatgacattgtcactgccttatcgctgtctaattaccctcgtgtcatggac
tgtcttgatgatgtaacaaataaagtgatggcaatggttattattcagagcattatgaaa
agtaatacgtgcatttctactgctgacgagattgaggtgttgtttgaattattaaaagga
ctgataaagggtttggatgggactgctgcagatgagctcgacaaggaggatttcaatgaa
gaacaaaattctgttgctcgccttatacatgtgctttataatgatgattcggaggaaatg
ttgaagattatctgcactgtgaggaagcatataatggctggaggcccaacacaattacct
tttacagttcctcctctcatattctctgcactcaggttggtgagaaagttgcaagctcag
gatggaaatgtagtaggagaagaagagcctgcaacgcctaagaaaatttttcagcttctg
aatgagacaattgaggctctttcatcggttccctcacctgagctgggattaaggttgtac
ttgcaatgtgctcaggctgccaatgactgtgatcttgagccaattgcttatgaatttttt
acacaggcattcatattatatgaagaagaagttgtggactcaaaggcccaggtgactgca
atgcatctaataattggggctctccagaggatgaatgtattgggtgttgagaacagggac
actctaacacacaaggccacaggatattctgcgaagcttttgaagaggcctgatcagtgc
agagcagtgtacgcttgctcaaatctattttgggttgatgaaaaggattgcatcaaggat
ggggaaagggtcctcctttgcctcaagcgtgccttgagaattgcaaatgcagctcagcag
atggccaatgcagtaactggtacaagtgggctggtcacattgtttgttgaaatattgaac
aagtacctgtacttttttgagaaaggaaacccacaggttaccagtgctgcaatccagggg
ctggtagaattaatcattaatgaaatgcagagtgactccaccacaccagatccagcatca
gaagccttctttgccagcacaatccggtacattcagttccagaaacaaaaggtaggtgtc
gtgggtgagaaattcgggcctatcaaggtgtaa
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