Populus euphratica (Euphrates poplar): 105109931
Help
Entry
105109931 CDS
T05872
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peu03016
]
105109931
Enzymes [BR:
peu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
105109931
Transfer RNA biogenesis [BR:
peu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105109931
Prokaryotic type
105109931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_2
Motif
Other DBs
NCBI-GeneID:
105109931
NCBI-ProteinID:
XP_011003107
UniProt:
A0AAJ6X2A4
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
METPDSKTTTSPPPQQESDLKRPKMSATTSEDEDAATTTPGDDTTIKKQRYKRRKIAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNP
CSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSNDKDTT
LKYEIKEEVSGLMDNGDGDIRNSEPVDETKVFQNEDSGKKSETTESGISSNSEDANANPE
IKDEMMVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYVGSHNFHNFTTRTK
AEDPSAQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESL
IQTALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMQHIY
SHIATTEHKEGSVALWLHSLNYXNYPDLRVCDNGDNITIEDKNGRESTMVENMTECTT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccggattcaaaaaccacaacatcaccaccaccgcagcaagaatcagacctc
aaaaggcccaagatgtccgctacaacctccgaggacgaagacgccgccaccacaaccccc
ggtgacgacacaaccattaaaaagcaaagatacaagcgccgcaaaatcgcaatattcttc
gcatactgcggcgttggctatcaaggtatgcagaagaacccaggtgccaaaaccatagaa
ggggacctcgaagaggccctttttcacgccggtgctgtccctgaacatgaccgtggcatc
cccaagcgctatgactgggctcgttctgctcgtactgacaagggcgtgagcgctgtgggg
caggttgtctcgggccggttctacatcgacccgcctggacttgtggaacgcttgcattca
aatctttctcctcagattaggattttcgggtacaagagagtgacgggttcgtttaatgct
aagaagttttgtgatcggagaaggtacgtctatttaattcctgtctttgctcttaatcct
tgctcgcatcgtgatagggagagcgtgttagctagtttagggtctggtagtgagcttgtt
aagtgcttgcagtgttcggaaagagggcgtaaggttgttggtgctgttggtaagcgcagc
tttgaatcaaaatctgatgtttccccaacagaaatttggtcaaatgataaagatactact
ctaaaatatgaaattaaagaggaggtcagtggtcttatggataatggtgatggagatatt
aggaattctgaacctgttgatgaaactaaggtctttcaaaatgaagacagcggtaaaaaa
tctgaaacgactgagtcaggcatttcatcaaacagtgaagatgctaatgccaacccggaa
attaaagatgagatgatggtgtccattgagaatggtgatgataaaaatacaaaatcagaa
gaggaagcgatcaagggaagtggattttgttacggagagaaggagaaagagagattcaat
cgaatattgaattattatgtggggagtcataacttccataattttaccactagaactaag
gctgaagacccctctgctcagcgctacatcatttcatttgatgcgaagactacagttact
gttgaaggcattgagtttgtgaagtgtgaggttgttgggcagagtttcatgcttcatcag
atacggaagatgattggtgttgccgtggctattatgaggaactgtgcatctgagtcgttg
atacaaactgctctgcaaaagaatgttaacatcaatgtgcctacagctcccgaggttggg
ttatacttggatgagtgctttttcacatcatataaccagaaatggaaagacagccatgaa
gaactttccatgaaagattacgaagaggaagcagaggaattcaagatgcagcacatatac
tcacacattgctacaacggaacacaaggaaggatcagtggctctgtggttgcattctctc
aactactgaaactatcccgatcttcgtgtttgcgacaatggagacaatatcaccattgaa
gacaaaaatggcagggaaagcactatggttgaaaacatgactgagtgtacaacttag
DBGET
integrated database retrieval system
