Populus euphratica (Euphrates poplar): 105109972
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Entry
105109972 CDS
T05872
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peu03016
]
105109972
Enzymes [BR:
peu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
105109972
Transfer RNA biogenesis [BR:
peu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105109972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
105109972
NCBI-ProteinID:
XP_011003156
UniProt:
A0AAJ6T2U8
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MEENRCKFWLPKKNRFCANSPLNDSQFCGNHKPRSIEQWIPCPIDPSHSVLKENLESHVK
RCPLLKQAQSLSLQPFYQKGINAGKEEEEEDYVSSEMKKNVVYSMTVTQFCKLINKIESV
HASTCKDIWESYKVPEACNMWIKREVDRKLPFQEKHVAQQASILGNLEDFGVIKSSVGSK
EADSQGFCSDDSNFVHAVIEFGAGRGYLTQMLADCYGFDRVFLVERKSYKLKADRSLRQK
ESLILERLRIDIEDLNLNAVESLRGIPYLAIGKHLCGPATDLTLRCCLSEQCNQGSVQDC
TSNANLKGLAIATCCHHLCQWKHYTNRKFMSDLGITKGQFHAMTWFTSWAVDADHGSDLP
DITDCSLQLQSIYYSEEKQCFGDIHGVEDVVRSMKPVERAVLGFKCKQIIDVGRMMWAKE
HGLDTQLVKYVPSGISPENHLLLARHAKCL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaccgctgcaagttctggcttcccaaaaagaaccgattttgtgccaactcc
cctctaaacgattcccagttctgcggcaaccacaaaccgaggtccattgaacagtggatt
ccatgccccatcgacccttctcattctgttctaaaagaaaatcttgaaagccatgttaag
agatgccctttattgaaacaagctcaatccttgtctcttcaaccattttatcaaaagggc
atcaatgctggcaaagaagaagaagaagaggattatgttagctctgagatgaagaagaat
gttgtttatagcatgactgtgactcaattttgcaaacttattaacaagattgaatctgtt
catgcttctacatgtaaggatatctgggaatcatataaagttccagaagcttgtaatatg
tggattaaaagagaagtagacaggaaattaccatttcaagagaaacatgtagcacaacaa
gcgtcaattcttgggaatttggaggactttggggtgataaagagttcagtaggaagtaaa
gaggctgatagtcaggggttttgtagtgatgatagcaattttgttcacgcagtcattgaa
tttggagcagggagagggtacttgacacagatgctggcagactgttatggatttgacaga
gtctttctggttgagcgcaagtcgtacaaacttaaggctgatcgatctttgcgacagaag
gagagcttgatattagagcgtttgaggattgatattgaggacttaaacttgaatgctgtt
gagtctttaaggggaatcccttatttggctattggtaaacatctctgtgggccagcaact
gatttgacactgagatgttgcttgtctgagcaatgtaatcaaggcagtgtgcaagattgc
acgagcaatgctaaccttaaaggccttgctatagcaacatgctgccatcatctttgtcag
tggaaacattacacaaacaggaagttcatgtccgatttggggatcaccaagggacaattt
catgcaatgacatggtttacctcctgggcagtagatgctgaccatggttcagatcttcct
gatattactgactgcagtttgcagttacaatccatttattacagtgaggagaaacaatgc
tttggggacatacatggggttgaagatgttgtgaggagtatgaaaccagttgaaagggct
gtgttgggttttaagtgtaagcagatcatcgacgtaggaaggatgatgtgggcaaaagaa
catggattagacacacagcttgtgaagtatgtcccttcaggcatctctccagaaaaccat
ttgttgcttgccagacatgccaagtgcttgtaa
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