Populus euphratica (Euphrates poplar): 105110060
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Entry
105110060 CDS
T05872
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105110060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105110060
Spliceosome [BR:
peu03041
]
Common components
Common spliceosomal components
SR proteins
105110060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Transformer
RRM_occluded
RRM_3
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105110060
NCBI-ProteinID:
XP_011003264
UniProt:
A0AAJ6T2X2
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGSGGGGGGSGGRFGISRHSEFRVIV
RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRN
PWARAYIRVKQYESSPSRSRSRSRSRSRSSRRNRSKSLERSVSRSRSRSRSKSRSASPLK
SSRPRSRSRSRSESPNKARSGSA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttttctcgtacaatctatgttggcaatttgcctgcagatataagagaa
tcagaaattgaagatttattttacaagtatggccgtatcctggatgttgaattgaagatt
ccaccgcgccccccttgttattgttttgttgagtttgagaatgctcgggatgctgaagat
gcaataaggggtcgcgatggctataactttgatggttgtaggttaagggttgagcttgcc
catggtggtagaggaccatcatcaaatgatcgtcgtggtgggtatggcagtggtggtggt
ggtggtgggagtgggggtcggtttggcatctcacgccattctgaatttcgagttattgtt
cgtggtcttccttcttctgcttcctggcaagatttgaaggatcatatgcgaaaagctgga
gatgtgtgttttgctgaagtttctcgtgatagtgatgggacttttggcgttgttgattat
acgaaccatgaagacatgaaatacgctattcgaaaacttgatgataccgagttcagaaat
ccttgggccagagcttatattcgggtgaagcagtatgagagctctccatcaaggagccgg
agccggagccggagcaggagcaggagttcaaggagaaaccggagcaaatcattggaaaga
tctgtttcaagatcaaggtcgaggtcaaggtcaaaatctagatcagcttcacctcttaaa
tcatccagaccaagatcaaggtccaggtccaggtcagaatctcccaacaaggcacggtct
ggaagtgcctga
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