Populus euphratica (Euphrates poplar): 105110174
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Entry
105110174 CDS
T05872
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03410
Base excision repair
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105110174
03410 Base excision repair
105110174
03420 Nucleotide excision repair
105110174
03430 Mismatch repair
105110174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105110174
03036 Chromosome and associated proteins [BR:
peu03036
]
105110174
03400 DNA repair and recombination proteins [BR:
peu03400
]
105110174
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105110174
DNA Replication Termination Factors
ELG1-RFC complex
105110174
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105110174
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105110174
Check point factors
HRAD17(Rad24)-RFC complex
105110174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
Mg_chelatase
AAA_11
AAA_5
AAA_24
AAA_14
nSTAND3
AAA_assoc_2
SLFN-g3_helicase
ResIII
AAA_2
AAA_19
DNAX_ATPase_lid
PhoH
AAA_28
DUF3853
AAA_7
AAA_30
DUF815
AAA_25
RNA_helicase
NPHP3_N
Parvo_NS1
bpMoxR
TIP49
IstB_IS21
AAA_18
NB-ARC
AAA_17
Motif
Other DBs
NCBI-GeneID:
105110174
NCBI-ProteinID:
XP_011003421
UniProt:
A0AAJ6X2X0
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKQLPEEIMS
NRILHICNEEGLTVDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI
PREVTEAIYAACKSGDFDLANKEVNYVIAEGYPVSQMLAQLFEVVVGVDDISDEQKARIC
KSLATADKCLVDGADEYLQLLDVVSNTMRALCNMPQEFSYDI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattattgcagagctcacagccatgggtggagaaatatcgaccaaagcaagta
aaagatgtagctcaccaagatgaggttgttcgcgtactcactaacactctcgagaccgca
aattgcccgcacatgcttttttatggcccacctggtaccggaaaaaccaccactgccctg
gccatcgcccaccagctctacgggcctgaactctacaagtctagggttctggaactaaat
gcaagtgatgaccgtggaatcaatgttgttcgtactaagataaaggattttgctgccgtg
gctgtaggttctggtcagcgtcaaggggtttacccttgtccaccttataagattatcatc
ctagacgaggcagattcgatgactgaagatgctcagaatgccctgaggcgtacaatggaa
acttactccaaagttactagattcttcttcatatgtaattacattagcaggatcatagag
ccacttgcttcaagatgtgcaaaattcaggttcaagcaacttccagaagaaatcatgagc
aatcgtatattgcacatttgtaacgaagaaggcctcactgtggacacagaggctctctca
accttaagctctgtctcacaaggtgatcttcgccgggctatcacatatttgcaaggagct
gctcgcctatttggatcgtcaatttcatccaaagacctcataagtgtgtcaggggccatt
ccacgagaggttactgaggcaatttatgcagcatgcaaaagtggtgactttgatttggcc
aacaaggaagtaaattatgtaattgcagaaggatatccagtctctcagatgcttgctcag
ttatttgaggtggtggttggagtagatgacatatcagatgagcaaaaggctcgcatatgc
aagagtttggctacagctgataagtgtcttgttgatggtgcagatgagtatttgcagctg
ctggatgtggttagcaacacaatgcgagcgctttgcaacatgccacaagaattctcttat
gatatttag
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integrated database retrieval system