KEGG   Populus euphratica (Euphrates poplar): 105110174
Entry
105110174         CDS       T05872                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03030  DNA replication
peu03410  Base excision repair
peu03420  Nucleotide excision repair
peu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105110174
   03410 Base excision repair
    105110174
   03420 Nucleotide excision repair
    105110174
   03430 Mismatch repair
    105110174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peu03032]
    105110174
   03036 Chromosome and associated proteins [BR:peu03036]
    105110174
   03400 DNA repair and recombination proteins [BR:peu03400]
    105110174
DNA replication proteins [BR:peu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105110174
  DNA Replication Termination Factors
   ELG1-RFC complex
    105110174
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105110174
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105110174
  Check point factors
   HRAD17(Rad24)-RFC complex
    105110174
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N AAA_16 Mg_chelatase AAA_11 AAA_5 AAA_24 AAA_14 nSTAND3 AAA_assoc_2 SLFN-g3_helicase ResIII AAA_2 AAA_19 DNAX_ATPase_lid PhoH AAA_28 DUF3853 AAA_7 AAA_30 DUF815 AAA_25 RNA_helicase NPHP3_N Parvo_NS1 bpMoxR TIP49 IstB_IS21 AAA_18 NB-ARC AAA_17
Other DBs
NCBI-GeneID: 105110174
NCBI-ProteinID: XP_011003421
UniProt: A0AAJ6X2X0
LinkDB
Position
Unknown
AA seq 342 aa
MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKQLPEEIMS
NRILHICNEEGLTVDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI
PREVTEAIYAACKSGDFDLANKEVNYVIAEGYPVSQMLAQLFEVVVGVDDISDEQKARIC
KSLATADKCLVDGADEYLQLLDVVSNTMRALCNMPQEFSYDI
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggcgccattattgcagagctcacagccatgggtggagaaatatcgaccaaagcaagta
aaagatgtagctcaccaagatgaggttgttcgcgtactcactaacactctcgagaccgca
aattgcccgcacatgcttttttatggcccacctggtaccggaaaaaccaccactgccctg
gccatcgcccaccagctctacgggcctgaactctacaagtctagggttctggaactaaat
gcaagtgatgaccgtggaatcaatgttgttcgtactaagataaaggattttgctgccgtg
gctgtaggttctggtcagcgtcaaggggtttacccttgtccaccttataagattatcatc
ctagacgaggcagattcgatgactgaagatgctcagaatgccctgaggcgtacaatggaa
acttactccaaagttactagattcttcttcatatgtaattacattagcaggatcatagag
ccacttgcttcaagatgtgcaaaattcaggttcaagcaacttccagaagaaatcatgagc
aatcgtatattgcacatttgtaacgaagaaggcctcactgtggacacagaggctctctca
accttaagctctgtctcacaaggtgatcttcgccgggctatcacatatttgcaaggagct
gctcgcctatttggatcgtcaatttcatccaaagacctcataagtgtgtcaggggccatt
ccacgagaggttactgaggcaatttatgcagcatgcaaaagtggtgactttgatttggcc
aacaaggaagtaaattatgtaattgcagaaggatatccagtctctcagatgcttgctcag
ttatttgaggtggtggttggagtagatgacatatcagatgagcaaaaggctcgcatatgc
aagagtttggctacagctgataagtgtcttgttgatggtgcagatgagtatttgcagctg
ctggatgtggttagcaacacaatgcgagcgctttgcaacatgccacaagaattctcttat
gatatttag

DBGET integrated database retrieval system