Populus euphratica (Euphrates poplar): 105110177
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Entry
105110177 CDS
T05872
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105110177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105110177
03036 Chromosome and associated proteins [BR:
peu03036
]
105110177
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105110177
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105110177
PBAF complex
105110177
GBAF(ncBAF) complex
105110177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105110177
NCBI-ProteinID:
XP_011003427
UniProt:
A0AAJ6T384
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MPASPSFPSSDGRGKWKRRKRGDSQITRKPPKHHHQEETEEPEEEDDAVEAEDNNNNVID
REDSDDPNPNQQPSGPDPNPQETEVLIDGGVRLCDFPPVTRLAVNRPHASVMAIVAAERA
NLAGESINRGQLVVNLENVSYGQLQAVSAVVADCDGSDLERSDGGNTGYVVTPPQIMDGK
GVVKRFWSRVHLVPMHSDWFSPALVNRLERQVVPHFFSGKSPDHTPEKYRECRNRIVAKY
MENPEKRLTVPDCQGLVVGIDNEDFTRIFRFLDHWGIINYCAAPPSCEYWNGGSYLREDP
NGEVHVPSAALKSFDSLIQFDKPKCRLKAADVYSSLSCRDDDLSDLDSRIRECLSENRCN
HCSQLLPSVCYQSQKEQVDILLCPDCFHEGRFVTGHSSLDFIKVDSTKDYGDIDGESWSD
QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPSMPNSTSP
SNREDNRRPHSCSNGSCLQGADAENRLPFANSGNPVMALVAFLASAVGPRVAAACAHASL
EALSADNRLGSERLHGREGGFHGEVANSIQLEEDSQHGSRGQNGAEVAPLSAEKVKAAAK
AGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKT
RQRFAAERIRMLSTRITPAGVASQMNPAGVAPSMVNNNVGNSRQQVMPSSSSQPSISGYG
SSNPAHPHNNQQVHSHMSYMQRGQPQPMFPLGPRLPMAAIQPSSPAPSNVMYNASGNSQP
NLNQMLRSVSGPSSGLG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttctttcccttcctcagatggtaggggcaaatggaaaaggcgaaag
cgaggagattctcaaattacacgaaaacctccaaagcaccaccaccaagaagaaacagaa
gaacccgaagaagaagacgacgccgttgaggcagaagacaataataacaacgtcatcgac
agagaagattctgatgacccgaacccaaatcaacagcccagcggacccgatccaaaccct
caagagaccgaggttttaattgatggtggggtccgcttatgcgatttccctcctgtcacg
aggctcgctgtgaaccgccctcatgcctccgtgatggcgattgtggcggccgagagggcc
aacctggccggggaaagcattaatagagggcaattggtggttaatttggagaatgtatcg
tacgggcagctgcaggcggtgtctgctgtggtagcggactgtgatgggagtgatttggag
aggagtgatggagggaatactggatatgtagtgacgccgccgcagattatggatggaaag
ggtgtcgtgaagaggttctggagtagagttcatttggttcctatgcattcagattggttt
tcaccggccttggtaaatcgactggagagacaagtggtgccacattttttctcgggaaaa
tctccagatcacacaccagagaaatacagggagtgtagaaatcgcattgttgctaaatac
atggagaatccagagaagaggctcacagttcctgattgtcaaggattggtagtcggcatt
gacaatgaagattttactcgaatttttagatttcttgatcattggggaattataaactac
tgtgcagctccaccaagttgtgaatattggaatggggggtcttatttaagggaggatcca
aatggtgaggttcatgtgccatcagctgctttaaagtcttttgatagtttgatccaattt
gacaagcccaaatgtaggctcaaggcggctgatgtttactcatcattgtcatgtcgtgat
gatgatctctctgacttggacagcagaattcgagagtgcttatctgaaaatcgttgcaat
cattgttctcagcttcttccctctgtgtgctaccagtcacaaaaggagcaggttgatata
ctgttatgccctgactgcttccatgaggggagatttgtgactggtcattcaagcttagat
tttattaaggtggattcaacaaaagattatggtgatatagatggggaaagttggagtgat
caggaaacattactgctacttgaggcaatggaaatttacaatgagaattggaatgaaatt
gcagagcatgtcggcaccaagtcaaaagcacaatgcatccttcattttctccgtctgcct
gtggaggatggcctgttggaaaacattgaagttccaagcatgcccaactcaaccagtcca
tcaaatagagaggataacagaagaccacactcatgttcaaatggatcctgcctccaaggt
gctgatgctgaaaataggctcccttttgcaaattctggcaatccagttatggcattggtt
gcttttctggcctccgctgttggaccaagagttgctgcagcctgtgctcatgcatctttg
gaagcgctgtctgcagataataggttgggttcagagagactacatggtagagaaggtggt
tttcatggagaagttgcaaattcaattcaactagaagaagatagccaacatggctcacgg
ggtcaaaatggggctgaggttgctcctctgtctgctgaaaaagttaaagctgctgccaag
gctggccttgctgctgctgcaacaaaagctaaactgtttgctgatcatgaagaacgagaa
attcagaggctatctgctaatataataaatcatcagttgaagagattggagcttaagctg
aagcaatttgcggaagtggaaacctttctaatgagagagtgcgagcaagtggagaagaca
aggcagaggtttgctgctgagcgaatccgcatgctatctacccggataacacctgcagga
gttgcttcacaaatgaacccagcaggtgttgctccttcgatggttaacaataatgttggc
aacagtaggcagcaggtgatgccttcctcttcttcgcaaccaagcatttcaggatatggc
agcagtaacccagcccatccacacaacaatcaacaagtccattctcacatgtcatatatg
caacgggggcagccacaaccaatgtttccattagggccgaggctgcccatggcagctata
cagccatcctcgccagctccgtcaaatgtcatgtacaatgcctctggaaattcacagcct
aacctcaatcaaatgctgcggtccgtgtcaggccctagctctggtttaggttga
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integrated database retrieval system
