Populus euphratica (Euphrates poplar): 105110267
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Entry
105110267 CDS
T05872
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105110267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105110267
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105110267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
TCTP
Motif
Other DBs
NCBI-GeneID:
105110267
NCBI-ProteinID:
XP_011003589
UniProt:
A0AAJ6X361
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MKRKRLHQSKHSFNAHPFEALCCGSWQNVELIQIRDGAMTLHFVDNHHRIDEKGPFSNIR
VKSRKATLSDCTCFLRPGIDVCVLSSSEHAKNTGEGNSEPVWVDAKISSIKRKPHVSHCS
CQFFVNLYVNQGPLGSERARLSKETVAVGINEISVLQKLDNDPCEAGNNQQEAQFYRWEF
CEDCSLVQRSKLFLGRFSADLTWLLVASVLKQVEFDVRSVQNKIVYQISGGENEHCSLKS
NNHINCVTFKVKDSISTPFVVQLVPTDACSEVGHIRDTNGTEQSPCYDVMSLRRSKRQNI
QPERFLACGAPAETEIGWVRSLPYTPLKWKAEEEEEEELHLPLAYLFGTHAGASCAEEQT
CNEVGVSSPKLELLEGIPVSRTKTCLKEIKSNLVNRREHQTEPGEVRAGMAKRRERQKST
MADQIVHQTRLRDAESGMANRKKHGTQIREVKLGGANRREHQDQLAIVPVHTEDVLVTFE
QFDSPVKTPEHYSQAFIEFPISYYRKTSSPAAHRKNDLDEDLMFGNGWGGKFSTKKVQRA
RYRSTHLKQDNSCAPMTYKRTALSAGAYNKLISSYMKKIDATIKSKEVPRIIDQWEEFKA
KHSSDQKEKMEPSSVKDDGESSETEMLWREMELCLASAYILEDNEALLSTQTTQKNCQHE
FKLDEEIGILCQICGFVKTEIKYVSAPFMEHKGWTAESKPQNEEDSEVKTDEDEGSSLFG
NHTSGEDVPVSEVNDNVWDLIPELRPKLHMHQKKAFEFLWKNTAGSLVPAHMEKTSKKIG
GCVVSHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLI
NGTRSSRVFKQTPAVLRGSGPRPSQDVVHILDCLEKMQKWHAHPSVLVMGYPSFLTLMRE
DSKYNHRKYMAKVLRESPGMLILDEGHNPRSTKSRLRKVLMKVETDLRILLSGTLFQNNF
CEYFNTLSLARPMFIKEVLKALDPKFKRKKKGAQKARHLLESRARKFFIDNIASKINSDE
AEEKMQGLNMLRNMTNGFIDVYEGTASDTLPGLQIYTILMNPTDIQHQILVKLHKIMEKC
PGYPLEVELLITLASIHPSLVNSSVCVKKIYNLEELMELEKLRFDCKKGSKVMFVLNLVY
RVVKNEKVLIFCHNIAPIKLFIELFENIFRWQQGKEILVLTGELELFERGRVMDKFEELG
GPSRVLLASITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLA
TGTVEEDKYRRTAWKEWVSRMIFSEEFVEDPSRWQAEKIEDDVLREIVEEDRVKSFHMIM
KNEKASTS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagcgtttacatcagtccaagcattcatttaatgcacacccttttgaggcc
ttatgctgtggctcttggcaaaacgtggagcttatacaaatcagggatggggctatgact
ctgcattttgtagataaccatcatagaattgatgagaagggtcctttctcaaacattcga
gtgaagtcaaggaaagctactttatctgattgcacctgctttctgaggcctggtattgat
gtttgtgtgctttcatcttctgagcacgcaaagaatactggggaaggaaattcagaacct
gtgtgggttgatgctaagataagttctatcaagcgaaaacctcatgtatctcactgctca
tgtcaattttttgttaacctctatgttaaccaaggccctcttggttcagagagagccagg
cttagtaaagaaactgtagcagtaggaatcaatgaaatttctgttcttcagaaacttgac
aatgatccatgtgaagcaggcaacaatcagcaagaagctcagttctaccgttgggaattt
tgtgaggactgttctttagtacaaagaagcaaactctttttggggaggttttcagctgac
ctgacatggctgcttgtagcatcagttctgaagcaagttgaatttgatgtaaggtcagtc
caaaataaaattgtctaccaaatttcgggtggtgagaatgagcactgttcattaaaatct
aataatcacataaattgtgtaactttcaaagtgaaagacagtatttcaaccccatttgtg
gtccaattggttcccactgatgcttgtagtgaagtaggccatattagagacaccaatggg
accgaacaatcaccatgctatgatgttatgagtttgcggcggtcaaagcgtcaaaatata
caacctgagcgcttcctagcctgtggtgctcctgcagagacagaaattggctgggtaaga
tccctgccatacacgccactgaaatggaaggcagaagaagaagaagaagaagaattgcac
ttaccactggcatacctgtttgggacacatgctggtgcaagttgtgcagaagagcaaact
tgcaacgaagtgggagttagttctcctaaactagaactcttggaaggtatccctgtttcc
agaaccaagacttgtttgaaggagattaaatcaaatctggttaacagaagagagcaccaa
actgagcctggagaggttcgagcaggcatggctaagagaagagaacgccaaaagtcaacc
atggctgaccaaatagtacaccaaactcgactcagggatgctgagtcaggcatggctaac
agaaaaaagcatggaactcaaattagggaggttaaattaggcggggctaacagaagagaa
caccaggatcaacttgctattgttcctgtgcatactgaagatgttctggtaacctttgaa
caatttgattccccagtgaagactcctgaacactattcacaagcgtttattgaatttccg
attagttattacagaaaaacgagttctcctgctgcacacaggaagaatgatcttgatgaa
gatttgatgtttggaaatggatggggtggaaaattttctactaagaaagttcaaagagca
agataccgatccacacatttaaagcaggataattcctgtgcgccaatgacttacaagcgg
acagccttaagtgctggcgcgtacaataaactaataagttcttatatgaagaaaattgat
gccacaatcaagtcaaaggaggtaccacgcattattgaccagtgggaagagtttaaagca
aaacatagctcagatcagaaggagaaaatggaaccatcttcagttaaggatgatggagaa
agctcagaaactgaaatgttgtggagagagatggaactatgcctcgcatcagcatatata
cttgaagataatgaggctctactttccactcagactacacagaaaaattgccagcacgaa
ttcaaactggatgaagaaattgggatattatgccaaatatgtggctttgtgaaaactgaa
ataaaatatgtttcagcaccatttatggaacacaaaggctggactgcagaaagtaagcca
cagaatgaagaggattcggaggttaaaactgatgaagatgagggctcgagtctttttggc
aatcatacttcaggtgaagatgtgcctgtatcagaagtgaatgacaatgtttgggacttg
atccctgagcttagaccgaaattacacatgcaccagaaaaaggcttttgagtttctatgg
aagaacactgctggatccttggtaccggcacatatggaaaaaacatctaagaagataggt
ggttgtgttgtctctcatactcctggagctggaaaaacatttctcatcattgcattcctt
gtcagctacttgaagttgtttccaggaaaacggcctctggtccttgctccaaagacaact
ctctatacctggtacaaggaatttatcaagtgggaaatccctgttccggttcatcttatc
aatggcaccagatcttctagagtcttcaagcagactccagcagtgcttcgaggatcaggt
ccaaggcccagccaggatgttgtgcatattttggattgcctggagaaaatgcaaaagtgg
catgcccacccaagtgtgcttgtcatgggctatccctcatttctgacattgatgagagaa
gactcaaagtacaaccacagaaaatatatggctaaagtgctgcgagagagtcctggaatg
ttgatacttgatgaaggacacaatcccaggagtacaaaatccaggttgaggaaggttttg
atgaaagtggaaacagatttgagaatattgctttcaggtactttgtttcagaataatttt
tgtgaatatttcaacaccctttccctagcaagaccaatgtttatcaaagaagttctgaag
gcattagacccgaagtttaagaggaaaaagaaaggggcacagaaagcacgtcatttgctg
gaatctcgtgccagaaaattcttcatagataacattgcaagcaaaattaattcggatgag
gctgaagagaaaatgcaaggtttgaatatgctgagaaacatgactaatgggttcattgac
gtgtatgaaggcacagcttctgacacccttcctggtctacagatttacaccatattaatg
aatccaacagatattcaacatcagattttggtgaaactccataaaataatggaaaaatgc
cctggataccccctggaagtagagcttttgataactcttgcttcaatacatccttcattg
gtcaattcttctgtctgtgttaaaaaaatttataatctggaggaactgatggaacttgag
aagttaagatttgattgtaagaaagggtccaaggtgatgtttgtgttgaatcttgtgtat
cgtgtagtcaagaacgagaaggttctgatcttttgccacaacattgcacccattaaatta
ttcattgaattgtttgagaatatctttagatggcagcagggtaaagaaattctggttctt
acaggggaactagagctgtttgaacgaggaagagtgatggataagtttgaggaattggga
gggccttcaagggttctacttgcatcaattacagcttgtgccgagggaataagtttgaca
gcagcttcacgtgtaattcttttggactcggagtggaatccttccaagacaaagcaggcc
attgcacgagcttttcggcctggccaacagaagatggtttatgtgtatcagcttctggca
acaggcacagttgaagaggacaagtatcgtaggacagcatggaaggaatgggtctcacgc
atgatatttagtgaggaatttgtggaggacccttctcgttggcaagcagaaaagattgag
gatgatgtattaagggagatagtagaggaggaccgggtgaagtcattccatatgataatg
aagaacgagaaggcttcaacaagttga
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