Populus euphratica (Euphrates poplar): 105110547
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Entry
105110547 CDS
T05872
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105110547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105110547
03036 Chromosome and associated proteins [BR:
peu03036
]
105110547
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105110547
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105110547
PBAF complex
105110547
GBAF(ncBAF) complex
105110547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
ANIS5_cation-bd
YEATS
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
105110547
NCBI-ProteinID:
XP_011003924
UniProt:
A0AAJ6T4N0
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MSMNNNNNNNNPPKSLGQSSSPFGNSGMVNPSMGANPTFPQAQAQMGAGFQGGQFQLSQA
QATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSPS
FSTPGNASAKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAI
LPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKK
PNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVTIQLDQRLYPDNHI
IIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRI
IAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEH
KIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHR
RRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRY
LNRKPAAGSDAPRSM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaacaacaacaacaataataacccgccaaagagtttggggcaatcttcg
tcaccatttggtaattcagggatggtcaatccatcgatgggtgcgaacccaacattccca
caagcgcaagcgcagatgggtgctggctttcagggtggtcagttccagctgtcccaagca
caggctactttgcaagcccatttgaaagcgcagcaggctcatgctcaagcacaagcagct
cacgctgctcaagttcaagctgctcatgcacaattccaagcacaattacaggcgcaaggg
gtttctcttaaccaaaatcagagtgctggaataggcaatttgggttcatcttcaccgtca
ttctcgactcctggcaatgctagtgcaaaacgtctccctcagaaacctctgggtagacct
cctggtgttcccatgtcgagcatggtttcaccattgaaacccatggatctttcttctgct
gcacgtaggaagaagcagaagctaccagagaagcagctacaagatagagtagcagcaatt
ctgccagagtctgctctgtacacccagcttcttgagtttgaaacccgtgttgatgctgct
ttagctagaaagaaggttgacattcaggaggcacttaaaagccctccttgtgttcagaaa
acccttcgaatttatgtcttcaatacatttgccaatcagataagaacaatccccaagaag
ccaaatgctgaccctccgacttggactcttaaagtaatcgggagaatcttggaagatggg
gtagaccctgaccagcctggagcagtccagaaatcaaacccattgtacccaaagttctca
tcttttttcaagagagtgacaattcagttggatcagagactatatcctgataatcatatc
attatatgggagcatgctcgatcacctgcacctcacgagggttttgaagtcaagagaaaa
ggggacaaagagttctctgtgaatatacgattggaaatgaattatgtgcctgagaaattt
aagctctctccagctttgatggaagttcttggtatagaggttgaaacccgtcctagaata
atagctgcaatttggcattatgtgaaggctaggaaactgcagaaccctgaggacccttca
tttttcaattgcgacgcacctcttcagaaagtatttggggaatcaaagatgaagttcacg
atggtttcacagaggatatctcagcatttatctcctccacagccaatacatttggagcat
aaaattaagctgtcggggaatagtccagctggaactgtctgctatgatgtggtggttgac
gtgccattcccaatacagagggagttgtctgctttgttggcaaatgctgagaagaataaa
gagattgatacttgtgatgaggcaatatgtactgctataaggaaaattcatgaacatcgt
cggagacgcgcattcttccttggatttagtcaatcacctgttgaatttgtcaatgctctc
attgaatctcaaagcaaggatttgaagctggtagctggagaagctagtagaaatgccgag
aaagagcgccgctcagatttctttaatcagccatgggttgaagatgctgttattcgatat
ttgaatcgcaagcccgctgccggaagtgatgctcctcggagcatgtga
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