Populus euphratica (Euphrates poplar): 105110637
Help
Entry
105110637 CDS
T05872
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105110637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105110637
03400 DNA repair and recombination proteins [BR:
peu03400
]
105110637
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105110637
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105110637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
WHD_SOWAH
HDA2-3
Motif
Other DBs
NCBI-GeneID:
105110637
NCBI-ProteinID:
XP_011004030
UniProt:
A0AAJ6T3G5
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MKLDEDSVLLSSLGVTSANPEDIERVVLEEARNKADKGGSTEEEPPDKLENVDPSSTNQA
KLYSKLRAVKFEIDAVASTVEEVTGVVSGEHQTYDDGGGTKKMDNGDDESGVQVSPDDFS
LQQALAADRLRSLKRTKVKLEKELLELRKDDATKAVEHDKLLANLVKEDPRPKKKSKKVL
KSGKNKEKQQKTVSFADDADFDLMLDGASSGFVETERDELVRKGILTPFHQLKGFERRLQ
QPGSSRGKNESNEEDKTDGLDSDSVVRAAHSMLEAAKARPTTKLLDSEDLPKLDAPTRPF
QRLKTPLKACQSPERDTEKRKGSERKRKRPLPGKKWRKSASWEDMGESEDSGRNLVTSIS
EEDVDDGYDNDSPFITLEGGLKIPEAIFSKLFDYQKVGVQWLWELHCQRAGGIIGDEMGL
GKTIQVLSFLGALHFSNMYKPSIVVCPVTLLRQWKREARKWYPRFHVELLHDSAQDVSCR
YPLKKKRARSYESDCEPEDSLDSDYEGSISCRKANKWDSLINRVFESDSGLLITTYEQLR
LLGEKLLDFEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLF
DFVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKMD
VNAHLPKKTENVLFCSLTSEQRSVYRAFLASTEVENILDGSRNSLYGIDVMRKICNHPDL
LEREHSYHNPDYGNPERSGKMKVVAQVLKVWQEQGHRVLLFTQTQQMLDIFENFLNSGGY
NYRRMDGSTPIKLRMSIIDEFNNSGDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPST
DMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFRARD
MKDLFTLNDDGEGGSTETSNIFSQLSEDVNVVGTKKEKLKKRKKNKAIAQHADDTIVDNE
NNSEIRALRREEKEKADCSDGEVDEETNILKSLFDANGIHSAVNHDVIMNAHDGEKMRLE
EQASQVAQRAAEALRQSRMLRSRDSISVPTWTGKSGTAGAPSSVHQKFGSTVNSQLIKSS
DSSSSNKTSNLKGIAAGTSAGKALSSAELLARIRGNQERAVGAGLDQQFGFASSSGTSAM
SENSGASRPPQTLSSVQPETLIRQICTFIQRRGGSSDSSSIVQHFKDRIPSKDLPLFKNL
LKEIASLREDANGKQWVLKPEYQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagatgaggattccgttttgcttagtagcttgggggtcacctcagcgaatcct
gaagatattgaacgtgttgtcttagaagaggcaagaaacaaagcagataagggagggagc
actgaggaggaacctcctgacaagttggaaaacgttgatccatcatctacgaaccaagca
aaactttatagtaaattgagggctgtaaaatttgaaatagatgctgttgcatcaactgtt
gaagaagtaacaggtgttgtgagtggcgaacaccagacttatgatgatggtggtggaaca
aagaaaatggacaatggagatgatgaaagtggagttcaggtgtctcctgatgacttctct
cttcaacaggccctggcagctgatcggctaagaagtctgaagagaactaaagtaaaactt
gagaaagagcttttggaattgcgcaaggatgatgctaccaaagctgtagaacatgataaa
ctgttagcaaaccttgtgaaggaagatccaagaccgaagaaaaagtcaaaaaaggttctg
aaatcagggaaaaacaaggaaaagcaacagaaaacagtttcattcgctgatgatgctgat
tttgatttgatgttggatggagcatcttcaggatttgttgaaacagaaagggatgaattg
gtgaggaaaggaatattaactccttttcatcagcttaagggctttgaacgtcgtcttcag
caaccagggtcatcacgtgggaaaaatgagtctaatgaagaagacaagactgatggtctt
gattccgatagtgttgtcagagctgctcattctatgttagaggctgcaaaagctcgtccc
acaactaaacttcttgattcagaagatctgccaaagcttgatgcaccaactcgtcctttt
cagaggctgaaaacacctttgaaagcttgtcagtccccagaaagagatacagagaaaagg
aagggttcagaaaggaaaaggaaacggcctttgcctggaaagaaatggagaaagagtgct
tcttgggaagatatgggtgaaagtgaagattctgggagaaacttggttacatccatctct
gaagaagacgttgatgatggttatgataatgactctcctttcataacacttgaaggtggt
cttaaaatcccagaagccattttcagcaaactctttgattaccagaaagtaggtgtgcag
tggctatgggaattgcattgccaaagagcaggcggtattattggagatgagatgggtctt
ggaaagaccatccaggtcttatcttttcttggggcattgcatttcagtaacatgtacaaa
ccaagtattgttgtttgccctgtcacactcttgagacaatggaaaagggaagcacgaaag
tggtaccctagatttcatgtggagctactacatgattctgctcaggatgtttcttgcagg
tatcctttaaagaagaagcgagcccggtcttatgaaagtgactgtgagcctgaagattca
cttgacagtgattatgaaggaagtatttcatgtagaaaggccaacaaatgggattccttg
ataaatagagtttttgaatctgattctgggttgcttattaccacttatgaacaattacgc
ttgctaggagaaaaattacttgactttgaatggggctatgcagttctggatgaagggcac
cgtattcggaatccaaatgctgaaattaccctggtttgcaaacagcttcagacggttcat
cgcattataatgacaggcgcaccaattcaaaacaaattgactgaattgtggtctttgttt
gattttgtttttcctggaaagttgggggtcttgcccgtatttgaggcagaatttgctgtt
ccaatctctgttggtggttatgccaatgcttcacctctacaagtatctacagcttacagg
tgtgctgtggtgctgcgtgacttgatcatgccttatcttctccggcgtatgaagatggat
gtcaatgcacatcttcccaaaaaaactgaaaatgtcctcttctgtagtcttacttcagag
caaagatctgtgtatagagcgtttctcgcaagcactgaggtggaaaatatactggatgga
agtagaaattctctgtatggaatagatgtgatgcgtaagatatgtaaccatcctgatctg
cttgagagagagcattcctatcataatccagactatgggaatcctgagcgcagtggaaaa
atgaaagttgtagcccaagtgctcaaggtgtggcaggagcagggtcaccgtgttcttctg
ttcactcaaactcagcaaatgctggatatttttgagaattttttgaattctggtggttat
aattaccgaagaatggacggttcaactcctataaaactgaggatgtccataatagatgaa
tttaacaactcaggtgatgtttttatattcattctaactacaaaagttggaggattaggg
acaaatctaactggtgcaaacagggtgattatctttgatcctgattggaacccctcaact
gacatgcaggccagggaacgtgcttggcgtattggccagaaaaaggatgtcactgtatat
agactgatcacacgtggaactattgaggagaaggtatatcaccggcaaatttataagcat
tttcttactaataagatattgaagaacccacagcagagaaggttctttagagctcgagat
atgaaggatcttttcacgctgaatgatgatggagagggtgggtcaactgaaacatctaac
attttcagtcagttatctgaagatgtgaatgttgttggtacaaagaaagaaaagctgaag
aagcgcaaaaaaaacaaagccattgcacaacatgctgacgataccatagttgacaatgaa
aacaactctgagatcagagctttgaggagggaagagaaagaaaaagctgattgtagtgat
ggtgaagtagatgaagaaacaaatatcttgaagagtctttttgatgccaatgggatacat
agtgccgtgaaccatgatgttattatgaatgcacatgatggagagaagatgaggcttgag
gaacaagcttctcaagttgcacaaagagcagcagaagcattacgccagtctcgaatgctc
cgtagtcgtgatagtatatctgtcccaacatggacaggcaaatcagggactgctggtgca
ccatcatcagttcatcaaaaatttggatcaactgtgaactcccagctgatcaaatcttct
gattcatcatccagcaataaaacaagcaacctaaaaggcatagcagctgggacttctgca
ggaaaagcattatcctcggcagaacttcttgccagaattcggggaaatcaagaaagagca
gttggtgccgggcttgaccagcagtttggatttgcatcaagttctggtaccagtgcaatg
tctgaaaatagtggagcatctaggccacctcaaactttatccagtgtccagcctgaaact
ttgattcgccagatctgtacatttatacaaagacgaggtggaagttctgattcatcaagc
atagtccagcacttcaaagacaggataccatcgaaggacctgcccttattcaagaatctt
ctgaaggaaatagcttcactgagggaagacgctaatggaaaacaatgggttcttaaaccc
gaatatcaatag
DBGET
integrated database retrieval system