Populus euphratica (Euphrates poplar): 105110873
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Entry
105110873 CDS
T05872
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105110873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105110873
03036 Chromosome and associated proteins [BR:
peu03036
]
105110873
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105110873
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105110873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
105110873
NCBI-ProteinID:
XP_011004362
UniProt:
A0AAJ6T429
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MFGASNPFGQSSNSPFGTTQPAFGQTSNASNNPFAPKPFGSPTSPFGAQTGSSIFGGTST
GMFGTPQTASFSATNAFGSSTPAFGASSTPAFGASSTPAFGASSSSAFGGSSVFGQKPFG
GFGSTAQASPFGSTNQQSQPAFGNSLFGSTPFGAPTQSAFGATSAPAFGATSTPAFGATS
TPPFGSTSTAPAFGSTSTAPAFGSTSSAPAFGAPSSTPAFGAPSTAPAFGSTSTPGFGST
GTTFTSSPLFGTGGAFGTSTTSGFGASTTTPAFGNSTVSAFGTPTTSAFGATSSPSFTFS
SSPGFGQSASAFGSSPFGSTTSTFPAQTSPFGAQSTTSPFGNNGFAQSGFGVQRPGSRAS
PYAETAEAEGGAQAGKLLSISAMTAYKDKSHEELRWEDYQLGDKGGPLPAGQSPGGGGFN
VSASQPNPFAPPTGLGQTSANIFSSTTTNLFAPKTQTSTPSFNTTSFGPSTSSNLFQSST
TPAFSAGSSPSLFGSTSTPSFSSTPSLFSSTVGQGTVSPFGSSMFNNTQPSLSFPSTTPS
LGQATAFSQPSPFGPSTTSSLFSSPSTGGLFSSTPSLITPNLGGFNQMTPSQPAPFQMSQ
PAQNAGTFASNFSQTQAAGMSGFAGVSNNLGQLSTPQSAVAIQPVPVTNPFGTLPAMPQM
SIGRAGTTPSVQYGISSMPVIEKPSPVRVSSLLTSRHLSQRRIRLPARKYYPKHDGPKVP
FFSDEEETPSTPKADALFIPRENPKALVIRPMDQWPPRASADKASPVNASAPVHENGKNS
ESDFANLSNGYTAGDKNKNLAENGVIKEQAPHVKVNQKPNGVHEDHSAQKEESYMTLSGH
RAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRHGY
GSIKFSGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKK
TGRQFTEGPKIEKYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVNHFSKYMLEEEEEDPDA
QATVDC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgctagcaatccttttggacaatcatcgaatagtccgtttgggacaacacag
ccggcttttggtcagaccagtaatgcaagtaacaatccttttgcgccgaagccatttggt
agtccgacttctccttttggtgcacaaacaggaagttctatatttgggggcacttcaact
ggaatgtttggcacaccccaaactgcttcattctctgcaacaaatgcttttggtagctca
acgcctgcttttggagcatctagtacccctgcttttggagcgtctagtacccctgctttt
ggtgcttcatcgtcatcagcatttggtggttcttctgttttcggtcagaagccttttgga
ggctttgggtctactgctcaagcaagtccttttggaagcacaaatcagcagtcacaacca
gcttttgggaatagtttatttggttccacaccttttggtgcaccaactcagtctgcattt
ggcgctactagcgctcctgcctttggcgctacaagtactcctgcctttggcgctacaagc
acaccaccctttgggtccacaagcaccgccccagcctttggctccacaagcactgcccca
gcctttggctccacaagctctgccccagcctttggtgccccaagctccaccccagccttt
ggtgccccaagcactgccccagcctttggctcaacgtcgactcctggttttggtagcaca
ggaactacatttaccagttccccgttgtttggaactggtggagcttttggaacttccacc
acttcaggttttggagcttcaactaccacacctgcctttgggaactcaactgtttctgcc
tttgggacaccaactacttctgcttttggggctacttcatcaccatcctttacgttttca
tccagtccaggttttggccaatcagcttctgcttttgggagcagcccatttggaagtact
acatcaacttttccagcccagacttctccctttggagcccagagtacaacatcaccattt
gggaacaatggctttgcccagtcaggttttggggtgcaacgtcctggaagtagagcatca
ccatatgcagaaacagctgaggcagaaggtggtgcacaggctgggaaattattgtcgata
tcagccatgactgcatacaaagataaaagccatgaggagctaaggtgggaggactatcaa
ttgggagacaaaggtggaccgcttcctgctggtcaatctcctggcgggggcggatttaat
gtctcagcctcacagccaaatccttttgctcctccaactggacttggtcaaacgtctgca
aatatattttcttcaacaactacaaacctgtttgctccaaaaactcaaacatctacacct
tcattcaacacaacctcctttggcccttcaacatcttccaatctctttcagtcatcaaca
acacctgcattctcagctggctcatctccgtctctttttggatcaacaagtacacctagt
tttagttcaacaccatccttgtttagttctactgtaggccaaggaactgtttcaccattt
ggttctagtatgtttaataacacccaaccatctctctcatttccatcaaccacaccttca
ctgggacaggctactgcattttcacagcccagtccatttggaccaagtaccactagttca
ttgttcagtagcccttccactggtggccttttctcaagcaccccgtctctgataactcca
aatctgggggggtttaatcaaatgacaccatcgcaaccagcaccttttcaaatgtctcag
ccagctcagaatgcaggtacttttgcctcgaactttagtcagacacaagcagctggtatg
agtggctttgctggtgtatcaaacaatttggggcaattgtctaccccacaaagtgctgtt
gctatacaaccagtgcctgttacaaatccatttggaacacttcctgcaatgcctcaaatg
tctattggtcgagctggaactacaccttcagttcaatatgggatttcttctatgcctgtc
attgagaaaccctctcctgttagagtatcatccttattgacttcgcggcacctgtcacag
agaaggattaggttgcctgctaggaaatattaccctaagcatgatggtccaaaggttcca
tttttcagtgatgaagaagaaacgcccagtacaccaaaggcagatgctctttttattccg
agggaaaacccaaaagctctggtgattcgtcctatggaccagtggcctccaagggcaagt
gcagataaagcatctccagtgaatgcatctgcaccagtacatgagaatggaaaaaattca
gaatcagactttgccaatctctcaaatggttacactgctggtgataaaaataaaaatttg
gctgaaaatggtgtgatcaaggagcaagctccccatgtcaaagtcaaccagaaacctaac
ggagtccatgaggatcattcagctcagaaagaggagtcctacatgacactcagtggtcac
agagctggcgaggctgcaattgtgtatgagcatggagcagatattgaggcgctaatgcca
aaactgcgacgttctgactattttactgagcctcgtattcaggaactggcagccaaggag
agggctaaaccgggtttctgccgccatgttaaggattttgtggttggaaggcatggctat
ggaagcatcaagttctctggtgaaacagatgttcgacggcttgatcttgagtcccttgtt
cagtttaataaccgggaggttattgtgtacatggatgatagcaagaaaccacccgttgga
caaggtctcaacaagcccgctgaggtaacacttctcaacataaaatgctttgacaaaaag
accggacgtcagttcacagaaggaccaaaaatagagaaatacaaggagatgctcaaaagg
aaggccgaagaccaaggcgccgaatttgtttcatatgaccctgttaaaggagagtggaag
ttcaaggtcaaccatttcagcaagtacatgctggaggaggaagaagaggatccggatgcg
caagctaccgtagattgttga
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