Populus euphratica (Euphrates poplar): 105111186
Help
Entry
105111186 CDS
T05872
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105111186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105111186
03016 Transfer RNA biogenesis [BR:
peu03016
]
105111186
Enzymes [BR:
peu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
105111186
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
105111186
Transfer RNA biogenesis [BR:
peu03016
]
Prokaryotic type
tRNA degradation factors
105111186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
WHD_DUF6293
Motif
Other DBs
NCBI-GeneID:
105111186
NCBI-ProteinID:
XP_011004776
UniProt:
A0AAJ6T5X4
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MLANPSTSTLHHRPNYTHNPPCSLFNHRCKLSLSPNCPRFSNSAKSNFSSLSLLLSRRKR
ERLFTVVNALEETSVAHDGPQSLPQPFSVKIPVGDRHILVETGHIGRQASGSVTVTDGET
IVYTSVCLDDVPSEPSDFYPLSVNYQERFSAAGRTSGGFFKREGKLKDHEVLICRLIDRP
LRPTMFKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPNTKVIAGVRVGLVD
NKFIVNPTTKEMEESELDLLLAGTDSAIFMIEGYCNFLTEEKLLDAVQIGQDAVRAICNE
VGVLVKKCGKAKMLDAIKLPPAELYKHVEEIAGDELVKILQITSKVPRRKALASLEEKVL
SILTEKGYVSKDARFGTPETVADLLEVEDEDEEIVVDGEVDEGDVHIKPIGRKFSPLLFS
EVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPDKIRPIDSRCGILPRAHGSALFTRGETQ
SLAVVTLGDKQMAQRVDNLVDEEEFKRFYLQYLFPPSCVGEVGRIGAPSRREIGHGMLAE
RALEPILPSENDFPYTVRVESTITESNGSSSMASVCGGCLALQDAGVPVKCMIAGIAMGM
VLDTEEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMRKA
LLQARDGRKHILAEMLKCSPFPSKRLSKYAPLIHIMKVNPKKVNIIIGSGGKKVKSIIEE
TGVEAIDTRDDGIVKITAKDLSSIEKSKSIINRLTMVPNVGDIYRNCEIKSVAPYGVFVE
IAPGREGLCHISELTSNWLPKAEDVFKVGDRVDVKLIEVNEKGQLRLSRKALLPEATPEK
SSAEHHATDKASPRRNVKAPKDDLAEEYKDKDSDVNSPRSDSIKDAPVSKKKVYKGLTSS
DTDGPKKNSVASVSSIASKDEGTLVNGDAKIG
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgaatcctagcaccagtactctccatcacagacctaattacacacacaaccct
ccatgttcactctttaatcatcgctgcaagctctctctctccccaaattgcccccgcttc
tccaattctgcaaaatccaacttttcttcgctttctctgcttctatcaagaagaaagcgt
gaaaggttgtttactgttgtcaatgctttagaggaaacttctgtggcacatgatggccct
cagtctttgcctcagcctttttctgtcaaaatccccgtcggtgacagacatatattggtt
gagacgggtcatattgggagacaagctagtggttctgtcaccgtgacggatggggaaact
attgtctatacatctgtttgtttggatgatgttcctagtgagccttctgatttttatcct
ctatctgtaaattatcaagagcgattttctgcagcaggtcgaactagtggaggatttttc
aaacgggaagggaaattgaaagatcatgaggttcttatttgtagattgatagataggcct
ttgcgcccaaccatgttcaagggcttttaccatgaaacccagatactatcttgggttttg
agctatgatggcttgcattctcccgattctttggctgtcacagcagctggaatagctgta
gctctttcagaagtaccaaatacaaaagtaattgcaggagttcgagttggccttgttgac
aataagtttattgtgaatccaacaaccaaggagatggaagagtcagaattggatttattg
ctggctggtacagacagtgcaatatttatgatagagggttattgtaattttcttacagaa
gaaaagttgcttgatgcagtacaaattgggcaggatgcagtgcgggcaatttgcaatgag
gtgggtgttttggtgaagaagtgtgggaaagctaaaatgcttgatgcaatcaaattacct
cctgctgagctatataagcatgtggaggaaattgctggtgatgaattggtgaaaatattg
caaattacaagcaaagtaccaagaagaaaagcccttgcatcactggaagaaaaggtgctt
agtatacttacagaaaagggatatgtaagcaaggatgcaagatttggaacccctgaaaca
gttgcggacttgctagaggttgaagatgaggatgaggaaattgttgtagatggtgaagtg
gatgaaggtgatgtccacataaagccaattggacgcaaattctctcccttgttgttttct
gaggtagatgtgaagctggtatttaaagaagttacatccaaattcttgcggaaacgtatt
gttgagggaggaaaaagaagtgacgggagaactccagacaagatacgtccaattgattcc
agatgtggaatacttcccagagcacatggaagtgctcttttcacacgtggggaaacacag
tcattagcagttgttacacttggtgataaacaaatggcacaaagagtagacaaccttgtt
gacgaagaggaattcaagaggttctatctacagtacttgtttcctccatcatgtgttgga
gaagtgggccggataggggcacctagtagaagagaaatcggtcatggaatgcttgctgag
agagctcttgaacctatattgccttctgaaaatgattttccttatactgtacgagttgag
agtacaatcacagaaagcaatggctcctcaagcatggcctctgtttgtggaggctgcttg
gcattacaagatgctggtgttcctgtaaaatgcatgattgctgggattgcgatgggtatg
gttcttgacactgaggaatttgggggtgatggaacgcccctcattctgtctgacataact
ggatcagaagatgcttctggagacatggatttcaaggttgctggaaatgaagatggaata
actgcatttcagatggacataaaggttggaggaatcaccttacctgttatgagaaaggca
ttgctacaagcaagggatggccgaaagcatattcttgctgaaatgttgaaatgctcacct
ttcccttccaaaaggctttctaagtatgccccattgattcacattatgaaggtcaatccg
aagaaagttaacatcatcattggttctggtgggaagaaggtgaagagtataatagaagaa
actggagttgaggctattgacacacgagatgatggaattgtaaaaattactgcaaaggat
ttgtcaagtatagaaaagtccaaatccattatcaatcggctaacaatggttccaaatgtc
ggtgatatctacaggaactgtgagatcaaatctgtagctccttacggagtctttgttgag
atagccccagggcgtgagggactttgccatattagtgaactaacttcgaactggttgcca
aaggctgaagatgttttcaaagttggagaccgtgttgatgttaaactaattgaggtaaat
gaaaagggacaacttcgacttagtcgcaaagcattgcttcctgaagccactccagagaag
tccagtgcagagcatcatgcaactgataaggctagtcccagaaggaatgtgaaagcacca
aaggatgatttagctgaagagtacaaggataaagacagtgatgtaaattccccaagaagt
gattcaataaaggatgctccagtttcaaaaaagaaagtttacaagggattaaccagttct
gacacagatgggccaaagaagaacagtgttgcatctgtcagtagcattgccagcaaagat
gaaggtactttagtgaatggagatgctaagattggatag
DBGET
integrated database retrieval system
