KEGG   Populus euphratica (Euphrates poplar): 105111187
Entry
105111187         CDS       T05872                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03030  DNA replication
peu03410  Base excision repair
peu03420  Nucleotide excision repair
peu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105111187
   03410 Base excision repair
    105111187
   03420 Nucleotide excision repair
    105111187
   03430 Mismatch repair
    105111187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peu03032]
    105111187
   03036 Chromosome and associated proteins [BR:peu03036]
    105111187
   03400 DNA repair and recombination proteins [BR:peu03400]
    105111187
DNA replication proteins [BR:peu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105111187
  DNA Replication Termination Factors
   ELG1-RFC complex
    105111187
Chromosome and associated proteins [BR:peu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105111187
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105111187
  Check point factors
   HRAD17(Rad24)-RFC complex
    105111187
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_lid_RFC1 RuvB_N AAA_22 DUF815 AAA_5 AAA_23 nSTAND6 Mg_chelatase RsgA_GTPase AAA_2 ABC_tran AAA_29 AAA_16 AAA_24 SprT-like nSTAND3 T2SSE TsaE TPGS1_C ATPase_2
Other DBs
NCBI-GeneID: 105111187
NCBI-ProteinID: XP_011004778
UniProt: A0AAJ6T4Y9
LinkDB
Position
Unknown
AA seq 354 aa
MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQY
PFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPPEIILKKLLSE
LLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFLAKFMSIYKAFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggttgacaagtacagacccaaaaccctagaccaggtcatcgttcatcaagaa
atcgccgaaaacctcaagaaactggtcactgaacaagactgtccacatttgctcttctat
gggccctctggttctggcaagaaaaccctaatcatggcccttctccgccagatctttggc
accagtgccgaaaaggtgaaggtggaaaataggacatggaaaatcgatgctggaagtaga
actatcgatctagagctgaccacattgtcaagcacaaatcatgtggagctgagcccaagt
gatgtaggattccaggacagatatatagttcaggagataattaaagagatggctaagaat
aggccaattgatacaaaaggaaaaaaaggatataaggtactagtgctcaatgaggttgac
aagctttcaagagaagcacagcattctcttcgtagaacaatggaaaaatacagtgcctct
tgccgtctaattctttgctgcaacagttcttcgaaggttactgaagcaattaggtctcgc
tgtttgaatgtgagaataaatgcacctaaggaggaacagattgttaaggtattggaattt
attggaaagaaagaaggactacagcttccacctggatttgctgctcgtatagcagataaa
tcaaataggagtttgagaagagctatactttcatttgagacttgccgtgttcaacaatat
ccattttcaagtaatcaagcaattcctccaatggactgggaggagtatgtttctgaaata
tgttcagacattatgagggagcagagccctaaaaggctgtttcaggttcgagggaagttg
tatgaactgcttattaactgtattcctccagaaattattctgaagaagctactttcagaa
ttattaaagaaattggatgaggaattaaagcatgaagtctgccattgggctgcatattat
gaacataggatgcgtatgggacagaaagccatatttcaccttgaagcgtttttggccaag
ttcatgagcatctacaaggctttcctcatagctacatttggctga

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