Populus euphratica (Euphrates poplar): 105111341
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Entry
105111341 CDS
T05872
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105111341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105111341
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
105111341
SWR1 complex
105111341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
105111341
NCBI-ProteinID:
XP_011004964
UniProt:
A0AAJ6X4F2
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKAHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKLKEEEQRLRKVALNISKDVKKFWVKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDKPSEQYAAQDKPRIAYNKGDDANIPEQVN
DEPQLDSTDNDDEYDVQSEDEVEDDEHTIEEDEALITAEERQEELEALHNEKDIPLEELC
NRYTVEKGSRESSENGAKPSANGEDHCERKGNNMSAASDMEISCSPVNASRRCGKNNGAL
PIPDNDLLEIRTNETRNQLSISDDPAKERVPYDFSDEQEDGDFNLAAQEEKDDETTLLEE
EELAKADSRNPIDEISLLQKESEIPLEQLLARYTKEPNNEVSEDESECASLLSDNVSNSP
GHEDELKQLDNSMDGIFERGNHPLVEELEKGNEKISEDGSESENGIADAAAAARSAQPTG
NTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLA
HLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKCKRQGWLKPNFF
HVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL
QNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGMVEGQERVNKEVVDRLHNVLRPFIL
RRLKRDVEKQLPMKLEHVIYCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLR
KVCNHPDLFEGRPIISSFDMAGMDIQLSSSVCSMFSPGPFSSVDLCALGLVFTHLDFNMV
SWESDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEETRKSLLEGRLREM
KQRAASIAWWNSLRCRKKPIYSTTLRELLTVKHPIYDIHRQKVEGLSSLCSSKLGDVVLS
PIERFQKMTDLVESFMFAIPAARSPAPIFWCSQTRTPVFLHSTYEEKCSEMLLPLLSPIR
PAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEVFMNLY
GYTYMRLDGSTQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNP
AMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFK
KLDPMELFSGHKTLQIKNMQREKNNNNGNEVSLSNADVEAALKYAEDEADYMALKKVEQE
EAVDNQEFTEDAIGRLEDDEFVNDDDMKADEPTDHEMTTCCKEGEVNLDENDCIEERAVA
FTGNKDDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKAALES
QVRFQETEWELDRIEKYKDEMEAEIDDDEEPLVYERWDADFATEAYRQQVEALTQHQLME
EKEAEAEAEANEKESADGHLDAMVCKVPRNPKSKSKKKPKKAKFKSLKKESLTSELKHMK
VEASIETLSADDDDEDDDDDDVIYPDDGTYSDAMSPYSSVQRKRKKAELAIDIDKKRSRK
NSKKFKKAPETCPFDVDSDLSGKQHGRSMELKPYDVVSDLEQKPAGRSKVGGKISISTMP
VKRVLMIKPEKLKKGNVWSRDCVPPPDSWLPQEDAILCAVVHEYGPHWSLVSETLYGMAA
GGFYRGRYRHPVHCCERFRELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDNIRMLL
NVAAEQPDHELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSVNQLPS
NSSKESAKRMKFTNLGHSSKLLAAALHDTSSRRPDDKVSYSNLSEVAPAIVEQLEITLEF
QKEEDDSLIQFPPVISLSIPGSGPLTSVNKDRAEAQHLRASTSIAENRFRDAARACVEGD
LGWVSSTAPANDFKLRLASKTQSLGKHKLAVSESTKPPRSKMKKTLIEHSEGHLFAEPVS
QPLPVLSSMDPNLRFDLPPTAIQDGKDEYSISCIEEELSAEMGTLDAVPHDYVLGLTSGL
DDFSSLPEFTDIG
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaaggcccgaggtctaagcttgatcacgagaccagagctcggcgtcaaaag
gcactggaagctccgagggagccgcgtcgccctaaggctcactgggatcacgtcttggag
gaaatggtttggttatcgaaggactttgagtcggagaggaaatggaaattggcacaagcg
aagaaagtggctttaagagccagtaagggcatgttggatcaggccaccagaggagagaag
aaactgaaggaagaggagcagcggctgcgaaaagttgctcttaatatttcaaaggatgta
aagaaattctgggttaaaatagaaaagctggtactttacaagcatcagatggagcttgat
gagaagaagaaaaaggcacttgataagcagcttgagtttcttctaggacaaactgagagg
tactctacaatgttagcagaaaatctagtggacaaaccatcagagcaatatgctgcacaa
gataaaccgagaattgcatacaataaaggagatgatgctaatatacctgagcaagtcaat
gatgagcctcagttggacagtacagacaatgacgatgagtatgatgtgcaatctgaagat
gaagtggaagatgatgagcatactattgaggaagatgaggctcttataactgcagaggaa
agacaagaagaattggaagctctgcacaacgaaaaagatattccactcgaggagctatgt
aaccgttatactgtagagaaaggtagcagagaaagtagtgaaaatggagctaagccatct
gcaaatggggaagaccattgtgagaggaaaggaaacaatatgtctgctgctagtgacatg
gagataagctgctcacctgttaatgctagtcgtcgttgtggtaaaaataatggtgccttg
cccattccagacaatgacttattggaaatcaggaccaatgaaaccagaaatcagttaagt
atttctgatgatccagccaaagaacgtgtgccatatgatttcagtgatgaacaggaagat
ggtgatttcaatcttgctgcacaagaagaaaaggatgacgagacaaccttgttggaggag
gaagagctggcaaaagcagattcaaggaatcccatagatgagatctcattgctgcaaaag
gagagtgaaatccctttggaacaattgcttgcaaggtataccaaggagcctaacaatgaa
gtttcagaggatgaatctgaatgtgcatctttattatcagacaatgtgtcaaattcccca
ggccatgaagatgaactgaagcagctggataactcaatggatggaatttttgaacgtgga
aaccatcctcttgtagaagaactagaaaagggaaatgaaaaaatttctgaagatggaagt
gagagtgagaatgggattgctgatgctgctgctgctgcaagatctgcacaaccaacaggc
aatacattctcaacaactaaagtgcgcacgaagttcccttttcttcttaagtatcctctt
cgtgaatatcaacatataggccttgattggcttgttacaatgtatgagaaaagattaaat
gggattctagctgatgaaatggggcttggaaagacgatcatgactattgctttgcttgca
cacctagcatgtgaaaagggaatatggggtcctcatctgattgtggttccgacaagtgtc
atgcttaactgggaaacagagtttcttaaatggtgtcctgccttcaagattttaacatat
tttggcagtgcaaaagagcgtaaatgcaagaggcaaggttggctgaaaccaaatttcttc
catgtatgcataacaacttacagactggttatacaggattcaaaagtcttcaagaggaag
aaatggaagtatttgattttggatgaagctcatctgattaaaaattggaagtcccagaga
tggcaaactcttttaaatttcaattcaaaaagacgcatcttattaactggcacacctctg
cagaatgatctcatggaactctggtcactaatgcatttcttgatgccccacatctttcaa
tctcaccaggaatttaaggactggttcagcaatccaataactgggatggtggagggacaa
gaaagagtgaacaaagaagttgttgatcgtttgcacaatgttctccgtccgtttatcctc
cgtcgattgaaaagggatgtggagaagcaactccccatgaaacttgagcatgtcatttat
tgtagactttcaaggaggcagcgtaacttgtacgaggatttcattgctagctcagagaca
caagctactcttgccactgccaacttttttgggatgatcagcattataatgcaacttcgt
aaagtttgtaatcatcccgacttatttgagggtcgtccaattattagttcttttgatatg
gctggtatggacatccaattgagtagttctgtttgttcaatgttttcacctggcccattt
tcatctgtagatctttgtgctctggggcttgtatttacacatcttgattttaacatggtt
tcttgggagagcgatgaagtaaaggctattgcaactccttcaagattaattgaagagcgt
gccaatttggctaacatagaagatgttgggcctgggtctaaacatttgaagaggttgcct
ggaacaaatatttttgaagagactagaaagtcattattggaggggagattaagagagatg
aagcaacgggcagcatctattgcatggtggaattccttgaggtgtcggaaaaaacccata
tactcaacaaccctacgagaacttctcacagtgaagcatcctatctatgatatccatcgc
caaaaagttgagggactctcctccttatgctcctctaagcttggtgatgttgttctttca
ccaattgaacgattccagaagatgactgatctcgtggaatcatttatgtttgcaattcca
gcagcacgttcccctgcacctatcttctggtgcagtcagaccagaactcctgtgtttctg
cattcaacttatgaggagaaatgctctgaaatgttgttgcctcttctttcacctattaga
cctgcaattgttcggagacaactttatttcccagacaggcgtctaatacagtttgactgt
ggtaaattgcaggagcttgcaattttgctaaggaagttgaagtcagaaggacaccgggta
ttaatattcacacagatgactaagatgcttgatattttggaggttttcatgaatttgtat
ggctacacttacatgcgtttagatggatccactcaaccagaagagagacaaacattaatg
cagcgtttcaacacaaatcccaaaatctttatcttcattttatcaacccgtagtggaggt
gttggcatcaatcttgttggggcagatactgtaatattctatgatagtgactggaatcct
gcgatggatcaacaagcccaagatcgctgccatcggataggacagacacgtgaagtacat
atctacaggttaatcagtgagagcaccattgaagaaaacatcttaaagaaagccaatcag
aagcgtgctcttgatgatctagttatacagagtggaggatacaacacagaatttttcaag
aagcttgatcctatggaattgttttctgggcataaaacacttcagattaagaacatgcag
agggagaaaaacaataacaatggaaatgaggtttctttgtctaatgcagacgtggaggct
gctctgaaatatgctgaagatgaagcagattacatggcattgaagaaagtcgaacaggaa
gaggctgtagacaaccaagagtttactgaagatgccattgggagattggaagatgatgaa
tttgtgaatgatgatgatatgaaggctgatgagcctacagaccatgagatgacaacttgt
tgcaaagagggtgaggtgaatttagatgaaaatgattgcattgaagagagagctgtagct
tttactgggaacaaagatgatgttgatatgttggctgatgtcaagcagatggcggcggcg
gcagctgctgctggacaagctatctcatcctttgaaaatcagctacgtccaatagacaga
tacgcagtccgttttcttgaactgtgggatccaattatagacaaagcagccttggaatcc
caagttaggtttcaggagacagaatgggagcttgatcgtattgagaagtacaaggatgaa
atggaagctgagattgatgatgatgaagagccattggtgtatgaaagatgggatgctgat
tttgcaaccgaggcataccgacaacaagttgaggcactaactcaacatcagttgatggaa
gaaaaggaagctgaagctgaagctgaagctaatgagaaggaaagtgcagatggacattta
gatgctatggtgtgtaaagtgccgcgtaatcctaaatcaaagtctaagaagaaaccaaag
aaagccaaattcaaatccctcaagaaagaatctctaacttctgaattgaaacacatgaaa
gtggaggcatcaatagaaactttgtctgcggatgatgatgatgaagatgatgatgatgat
gatgtgatatatcccgatgatggtacatattcagatgctatgtctccttattcaagtgtg
cagagaaaacgtaagaaagcagaattagcaattgatatagacaaaaagaggtcaaggaag
aatagcaagaaattcaaaaaagctcctgaaacgtgcccttttgatgtagattcagatctg
tctggaaagcagcatggcaggtctatggaattaaaaccatatgatgtggtttctgatctt
gagcagaaaccagctggcaggagcaaggtgggaggcaaaatctccatcagtaccatgcca
gtgaaacgggtgttgatgataaagccagagaagttaaagaaagggaatgtttggtcgaga
gattgtgttcctccacctgattcatggttgccacaagaggatgcaatattatgcgctgtt
gtacatgaatatggccctcactggagcttggtcagtgaaactctctatgggatggctgct
ggtgggttttatcggggaagatatcgccatccagttcattgttgtgagagatttagagaa
ctcatccatagatatgttttatcttctccagaatatcctatcaataatgaaaagatgagc
aatatggtctccgggaaggcccttctcaaagtaactgaggataacatacggatgttatta
aatgttgctgctgagcagccagaccatgagttacttctccagaagcacttcacagcactg
ctttctgctgtgtggagggtgaactctcgtgctgaacgtcaacagaacttgtcatcatct
cgaaatgctctttataatcatggaagggttttcaattcttctgtcaatcagttaccttcg
aattcctcaaaggaatctgcaaaaagaatgaaattcactaatttgggacatagtagcaag
ttgcttgctgctgcactccatgacaccagcagtagaaggccagatgataaagtttcctat
tccaacttgagcgaagttgctcctgccattgttgagcagttggaaataacattggaattc
caaaaagaggaagatgattctttgattcaattcccacctgtaataagtttgtcaatacct
ggctcaggaccattgacatcagtaaataaggatagagcagaggctcaacatctcagagca
tccacaagtatagctgaaaatcgattcagggatgcagcaagagcttgtgttgaaggggat
ttgggttgggtttcatctaccgcaccagcaaatgatttcaagctgcggctggcttcaaag
acacagtccttgggaaagcacaagctcgccgtctccgagtcaaccaagcctcctaggtca
aagatgaagaaaactttgatagagcacagtgagggacacctttttgctgagccagtatcc
cagccactgcctgtactgtcatctatggatcccaatttaaggtttgacctgccaccaaca
gccattcaggatggcaaggatgaatattccatctcgtgcattgaggaggagctttcagcg
gaaatggggaccttggatgctgtcccacacgactatgttcttggtttgacatcgggtctc
gatgatttttcatcgttgcctgaatttactgacatcggataa
DBGET
integrated database retrieval system
