Populus euphratica (Euphrates poplar): 105111567
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Entry
105111567 CDS
T05872
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu00040
Pentose and glucuronate interconversions
peu01100
Metabolic pathways
Module
peu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105111567
Enzymes [BR:
peu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105111567
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
DUF7460
Motif
Other DBs
NCBI-GeneID:
105111567
NCBI-ProteinID:
XP_011005268
UniProt:
A0AAJ6T633
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MAVLPLLIALLSIIFFASSPLAKAAQYSVLSYGAMPDGKTDSTKAFVAAWSQACASTQPA
TISVPKGSFALGQVRFQGPCKNNAIMVRIDGTLVAPSDYGVLGRAQNWLIFEHVNGVTIS
GGTLDGQGAGLWSCKNSGKNCPRGATSLEFSNSNNIAITGLASLNSQMFHIVINACQDVK
VQGVRVSAAGDSPNTDGIHVQSSTGVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGH
GISIGSLGKDSQEAGVQNVTVKTTTFTGTENGVRIKTWGRPSNGFARNILFQHAVMTNVH
NPIVIDQNYCPGEKGCPGQVSGVKISDVTYQDIHGSSATELAVKFDCSKTNPCSGIKLDD
VKLTYNNQPAEASCSNAGGVASGVVQPTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccttccacttcttattgctcttctctccatcattttctttgcctcctcacct
ttagccaaagcagcacaatacagtgtgctcagttatggagccatgcctgatggaaaaact
gactcaaccaaggccttcgtggctgcttggtcacaagcatgcgcctccacacagccagcc
actatctctgttcctaaagggagtttcgctttaggtcaagtgaggtttcagggtccttgc
aagaataacgctattatggtacgtatagatggtaccctagtcgccccatcagactatggc
gtccttggtagggctcaaaattggctaatctttgagcatgttaatggggttactatatcc
ggagggactcttgatggacaaggggcaggactgtggtcatgcaagaattccggcaagaat
tgccccagaggcgcgacgtcacttgaattctccaattcaaacaacattgcaattaccgga
ttggcatcactgaatagccaaatgttccacattgtcatcaatgcctgccaagacgtcaaa
gtgcaaggagtgagagtctctgctgccggagatagccctaacaccgatggaattcacgtt
caatcatcgaccggagtcaccatcttgaattctaggattggaactggtgacgattgtgta
tcaattggccctggtacctctaatctttggattgaaaatgtggcatgtggacctggccat
ggaatcagcattggaagtttgggcaaggattctcaagaggctggtgtgcaaaatgtaaca
gtgaagaccactacattcacaggcacagaaaatggagtgagaatcaagacatggggaagg
cctagcaatggtttcgccagaaatattcttttccaacatgcagtcatgactaatgtccac
aatcccatagtaatcgaccagaactattgccccggcgagaagggctgcccaggccaggtt
tccggtgtgaaaattagtgatgtgacctaccaagatatccatggatcatcagcaacagaa
cttgcggtgaaatttgattgtagcaaaacaaatccatgctcggggatcaaattggatgat
gtaaaactcacttacaacaatcaaccagcagaagcgtcgtgtagcaatgctgggggagtt
gcttcaggcgtggttcagcctactagctgtttataa
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