Populus euphratica (Euphrates poplar): 105111681
Help
Entry
105111681 CDS
T05872
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105111681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105111681
Membrane trafficking [BR:
peu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105111681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
zf_RING_Vps8
WDR55
Beta-prop_HPS5
Beta-prop_EML_2
WDR90_beta-prop_4th
EIF3I
zf-RING_2
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
zf_RING_Vps8_fungal
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Beta-prop_WDR11_2nd
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
105111681
NCBI-ProteinID:
XP_011005423
UniProt:
A0AAJ6T673
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTPITSENGVDGDDEREEDDDEEVEEDDDEEEEEEEEEEEEEAPRLKYQRMGGSIPSLLS
NDAASCIAVAERMIALGTLDGTVHILDFLGNQVKEFAAHTAAVNDLIFDIEGEYIGSCSD
DGTVVINSLFTDEKVLKFEYHRPMKAIALDPEYSRKMSKRFVAGGLAGQLYFNSKKWLGY
RDQVLHSGEGPIHAVKWRTSLIAWANDAGVKVYDAANDRRITFIERPRGSPRPELLLPHL
VWQDDTLLVIGWGMSVKIASIRANQQKGANGTYRDVPVSRMNQVDIVASFQTSYYISGIA
PFGDSLVVLAYIPVEEDGEKEFSSTISSRLGNAQRPEVRVVTWNNDELATDALPVHGFEH
YKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWH
EKALAAVEAGQGRSELVDEVGSRYLDHLIVERKYAEAASLCSKLLRGSASAWERWVFHFA
HLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPLIYSALPVIS
AIEPQLNTSSMTDALKEALAELYVLDGQYEKAFSLFADLMKPDIFDFIEKHNLHDTIREK
VVQLMMLDCKHTVPLLIQNKDLISPPEVVSQLLTAGNKCDSRYFLHLYLHALFEANPHAG
KDFHDMQVELYADNDLKMLLPFLRSSQHYTLEKAYDICVKRDLLREQVFILGRMGNSKKA
LAVIINKLGDIEEAVEFVTLQHDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVNM
VPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARRAICLSNEE
EDARAKRDGSRDSQAAGRTASARTMEVKSKTRGETRCCMCFDPFSIRDVSVVAFFCCHAY
HMSCLMDSMHTVSSRKGSGATSGISEYDSNDEDEETVSGVPRLRCILCTTAAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactccaattacgtcggagaatggcgtcgatggagacgacgagcgagaagaagacgac
gatgaagaagtagaggaagatgacgatgaagaagaagaagaggaggaggaggaggaggag
gaggaggcaccaagactcaagtaccaaagaatgggaggtagcataccttctcttttgtcc
aatgatgcggcgtcgtgtattgctgttgccgaacgcatgattgctctcggcactctagac
ggcaccgttcacatcctcgatttcctcggcaaccaggttaaggaatttgcggcgcataca
gcggcggttaatgatcttatctttgatatagaaggagaatatataggaagttgttcagac
gatggcactgttgtaattaatagtcttttcaccgacgagaaggttttgaagtttgaatat
catcggccgatgaaggcaattgctttagaccctgaatattctagaaaaatgtctaaaaga
tttgttgctggtggtttagctggtcaattgtattttaactccaagaaatggctaggctac
cgtgaccaggttttacactctggggaaggtccgatacatgctgtgaagtggagaacgagt
ctcattgcgtgggctaatgatgcgggtgtgaaagtttatgatgctgctaatgatcgaaga
ataacttttattgaaagaccgcgagggagtccgcgtccggagcttttgctcccgcattta
gtttggcaggatgatactctcttggttattgggtggggaatgtctgtaaaaatagcatcg
ataagagcaaatcagcaaaagggagctaatgggacatatagggatgttccggtgtccagg
atgaaccaggtggatattgtggcttcttttcaaaccagctattatatttcaggaattgct
ccatttggtgattctttggttgttctagcttatattcctgtggaagaagatggagagaag
gaattcagtagcaccatttcatcaagactgggcaacgcacagagaccagaagtacgagtt
gttacatggaataatgatgaacttgcaacagatgccctacctgtgcatggttttgagcat
tacaaggcgaaggactattcccttgctcatgctcctttctcaggtagcagctatgctggt
ggtcaatgggctgctggtgatgaaccattatactatatcgtttccccgaaggatgtggtg
attgcaaagcctagggatgctgaagatcatattgcgtggcttctagaacatggttggcat
gaaaaagcattggcagcagttgaagcaggccagggaaggagtgaactcgttgatgaggtg
ggatccagatatcttgatcatttgatcgtggaaaggaaatatgctgaagctgcatctttg
tgttccaaattgctccgagggtctgcttcagcatgggaaagatgggttttccattttgct
catttgcgtcagcttcctgtgttggtcccttacatgccaacagaaaaccctagacttcgt
gatactgcttatgaggttgctcttgtagctctggcaacaaatccatcttttcataaagat
ctcttgtcgactgttaaatcttggccaccgttgatttattctgcattgcctgttatatct
gctatagaacctcagctaaatacttcttctatgacggatgcactcaaggaggcactagca
gagttgtatgtacttgatgggcagtatgagaaagccttttcactttttgctgatctcatg
aagccagatatatttgatttcattgaaaagcacaacttacatgataccatacgtgaaaag
gttgtccaactgatgatgcttgattgcaagcacacagttcctctcttgatccagaacaaa
gacttaatttctccacctgaagttgtctcgcaactgttgactgccggcaataagtgtgat
tcaagatatttcctacacttatatcttcatgccttatttgaagcaaatccacatgcagga
aaggattttcatgatatgcaagtagagctttatgcagataatgatctgaaaatgctacta
ccttttctccggagcagccaacattacacccttgagaaggcatatgacatttgtgtcaaa
agagatcttttaagagagcaagtcttcatacttggaagaatgggaaactcaaagaaggcg
ctagctgtcatcataaataaattaggggacattgaagaggctgtagagtttgtaaccctg
cagcacgatgatgagctatgggaagaattaattaagcaatgtcttcacaaacctgaaatg
gtgggggtattgttggagcacactgttggcaatcttgatcctttatacattgtaaatatg
gtgcccaatggcttggaaataccccggcttagggatcgactagtcaaaattatcaccgat
tacagaacggaaacatctttgagacatgggtgcaatgatattcttaaggctgattgtgta
aatctcttggtcaaatactacaaagaagcgagaagggcaatttgcttaagcaacgaagaa
gaagatgctcgagcaaaaagggatggcagtagggattcacaagcagctgggagaacagcg
agtgcaaggaccatggaggttaagtcaaaaaccaggggagaaacaagatgttgcatgtgt
tttgatcccttctctatacgagatgtatcagttgtcgcattcttttgctgtcatgcttat
cacatgtcttgtcttatggattctatgcacactgttagtagcagaaaagggagtggagcc
acttctgggatatcggaatacgatagcaatgatgaggatgaggaaaccgtttctggtgtt
cctcggctgagatgtatcttatgtactactgctgctagctga
DBGET
integrated database retrieval system
