Populus euphratica (Euphrates poplar): 105111837
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Entry
105111837 CDS
T05872
Name
(RefSeq) protein tipD
KO
K17890
autophagy-related protein 16-1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105111837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peu04131
]
105111837
03029 Mitochondrial biogenesis [BR:
peu03029
]
105111837
Membrane trafficking [BR:
peu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105111837
Others
Specific organelles associated proteins
Auto phagosome
105111837
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105111837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ATG16
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR54
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_EIPR1
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_DCAF12
Phlebovirus_NSM
PEP5_VPS11_N
PQQ_2
Beta-prop_IP5PC_F
GCD14
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
105111837
NCBI-ProteinID:
XP_011005601
UniProt:
A0AAJ6T7H2
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSQEEIGREAIKQALKALKKRHLLEEGAHAPAFIALSRPIISQGSEWKEKAENLEVELQQ
CYKAQSRLSNQLVVEVAESRAAKTSLQEKEAAITDLQNEVTQIRDECGQLKEDFEEKIKA
LELVISENQAVRTQLEEMTLKAKNAEAENKMLIDRWMLQKMQDAERLNEANALYEEMIDR
LKASGLESLARQQVDGVVRRNEDGAEYFVESTIPSTCKHKITAHEGGCASILFEYNSGKL
ISGGQDRSIKMWDTNTGSLCHTLYGCLGSVLDLSITHDNRSIIAASSSNNLYVWDVTTGR
VRHTLTGHTDKVCAVDVSKISTRHVVSAAYDRTIKVWDLQKGFCTNTIIFHSNCNSLCFS
MDGQTICSGHVDGNLRLWDIQTGKLLSEVAAHSLAVTSISVSRNGSVVLTSGRDNLHNLF
DMRSLEVCGTLRATGNRVASNWSRSCISPDDHYVAAGSADGSVHIWSISQGDIVSTLKEH
TAPVLCCSWSGLGKPLASSDKNGIIYNWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaagagattggtcgagaagcaataaagcaggcgttgaaagctttaaagaag
cggcatttactggaagaaggagctcatgctcctgcctttattgctctttccaggcccatt
atttctcagggatcagagtggaaagagaaagcagaaaatctagaagtagaacttcagcaa
tgttacaaagcgcagtctcgtttatccaaccaacttgtggtggaggtggccgaatcgaga
gcagcgaagacttcactgcaagagaaggaagcagctatcactgatttgcaaaacgaggtt
actcaaataagggatgagtgtggtcagttgaaggaggattttgaggaaaagattaaagca
ttagaattggttataagtgagaaccaggcagttagaacgcaattggaagagatgactctc
aaagctaagaatgctgaggctgaaaataagatgttgattgatcgatggatgctacaaaag
atgcaggatgccgaacgccttaatgaggctaatgcactttatgaagaaatgattgatcgg
ctcaaggcaagtggtttagagagccttgctaggcaacaagtggatggagttgtccggcga
aatgaagatggtgccgagtactttgttgaatcaacgatcccttctacatgcaagcacaag
atcactgctcatgagggtggctgtgcttctatattgtttgagtacaattctggaaaattg
attagtgggggacaagaccggtcaatcaagatgtgggatacaaatacaggatcattatgt
cacactctttatggttgtcttggctctgttcttgatctttccattactcatgacaataga
tccatcattgcagctagcagctcaaacaacttgtatgtatgggatgttaccacagggcga
gtacgtcacactctcacaggtcacactgataaagtgtgtgctgttgatgtcagcaaaatt
tcaactcgtcatgttgtcagtgctgcttatgatcgtaccataaaagtgtgggatctgcaa
aaaggcttctgcaccaacacgatcattttccacagcaactgcaattctctttgcttcagc
atggatggacagactatctgttcaggccatgttgatgggaatcttcgtttgtgggatatt
cagacaggaaagctacttagtgaagttgctgcacattcgcttgctgtcacgtctatatct
gtgtctcgaaatggaagtgttgtactgacaagtgggagagacaacttgcataacttattt
gatatgcggtccttggaagtttgtggcactctaagagcaactggaaacagagtggcttct
aattggagtcgctcctgtatcagtcctgatgaccactatgttgctgctggttcagctgat
ggatctgtgcatatttggtcaatatctcaaggtgatatagtaagcaccctgaaggaacac
acagctccagtcctttgttgttcatggagtggtcttgggaaaccactagcctcttctgac
aagaatggaattatctataactggacatga
DBGET
integrated database retrieval system