Populus euphratica (Euphrates poplar): 105111866
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Entry
105111866 CDS
T05872
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03015
mRNA surveillance pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105111866
09122 Translation
03013 Nucleocytoplasmic transport
105111866
03015 mRNA surveillance pathway
105111866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105111866
03041 Spliceosome [BR:
peu03041
]
105111866
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105111866
Spliceosome [BR:
peu03041
]
Complex C
Other components
EJC/TREX
105111866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
HU-DNA_bdg
Motif
Other DBs
NCBI-GeneID:
105111866
NCBI-ProteinID:
XP_011005638
UniProt:
A0AAJ6X523
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSSPYPVLGTKPIDQWKVTELKEELKRRRLKTNGLKDDLIRRLDDALRIEMENDEALRTE
RESEEALRSEQENAAKVVVDVDNGVHLENPPIVGVKMEEAVPVVAETVKDVMDDSTNRDE
KVDNVMIQVGTNESVKTMGVGELQEEVQKGGIDSSRTDEDLNVHSTTVETSVTVTESVVS
ELALSGKAMGTGELQEEVQMGGIDSSRKEEYLNVHATTVETSITVAKSVVPELALSGQDV
QNSGTQEANGNSNIQLENEGLKPQLENESLKSPDEDATLDSSAPDNQVSEVSPSLGFQVK
SDSISTDSVSINEKIELKDNIIADNVKLELDNVKPEMVEPSFSNVVPVGGESHPMDVEEP
QEKRESVEEKDDSSGTNAYMSKNNDSVDVGYSEKLNLDRSSGDDSMEEDVLESKQIDSKY
NSDEVGDGSEKKNERPVVKEENLVGVAGKDLSTDQKEVYVENKIHPVVPVEKRKFNDQEI
AGNSEPLKRQRRWNSENIKVPEQQSSNLTPTTTPKDGFQPAPLRRNFSRSESSVSEEAPK
ERVVPPSQKPLTNSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDHIKTHCYVTYSSVEE
ATETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMRVDAPPQSPSTPVTPSAAAPAPPTLQP
QPSPRQQASRQQLPPPPSLPPPPPLSNPPHARERLDLPPPPPLPEKHDPPIVTLDDLFRK
TKTAPRIYYLPLLEEQVAAKLAERGKNTKQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccatatccagttcttggaacaaaacccatagaccagtggaaggttactgag
ttaaaagaagagcttaaaaggcggagattgaaaaccaatggtttgaaggatgatttgatt
agacggttggatgacgcacttcgtattgagatggaaaatgatgaagcacttcgcacggag
agggaaagtgaggaagcactacgcagcgagcaggaaaatgctgcgaaggttgtggtggat
gtggataatggtgttcatttagagaacccacctatagtaggggtgaaaatggaagaggca
gtaccagttgttgctgagacggttaaagatgtcatggatgattccactaatagagatgag
aaggtggataatgttatgattcaggttggcaccaatgagagtgtgaaaaccatgggtgta
ggagaacttcaagaagaggtccaaaagggtggtattgattcttctaggacagatgaggat
ctcaatgttcattcaactactgtggagaccagtgttactgttaccgagagtgtggtgtca
gaattagcattgagtgggaaagccatgggtacaggagaacttcaagaagaggtacaaatg
ggtggtattgattcttctaggaaagaagagtatctcaatgttcatgcaactactgtggaa
accagtattactgttgccaagagtgtggtgccagaattagcgttgagtgggcaagatgtg
caaaattctggaacacaggaggcaaatgggaactcaaatatccagctggagaatgagggt
ttaaagccccagctggagaatgagagtttgaagtctccagacgaggatgccacgcttgac
tcttctgctccagacaaccaggtatctgaggtcagccctagtttagggtttcaagtaaaa
tctgattctatttctactgattctgtatcaattaatgaaaagattgaactaaaggataat
ataattgctgataatgtgaaattagaactagataatgttaagccagagatggtggaacca
tcattcagtaatgttgtcccagttggtggtgaatcacatccaatggatgtcgaagagcca
caagagaagagggaatctgttgaagagaaagatgacagcagtggtacaaatgcatatatg
agcaagaataatgatagtgttgatgtggggtactcggaaaagttgaatttagacaggagt
tctggtgatgactccatggaggaagatgttttagaaagtaagcaaattgattcaaagtat
aattctgatgaagtgggtgatgggagtgaaaagaaaaatgaaaggcctgttgtgaaggag
gagaatcttgttggtgttgctgggaaggacttatctactgatcaaaaggaagtctatgtt
gagaataagattcatccagttgtgcctgtggagaaaagaaaatttaacgatcaagaaatt
gctggaaactcggaacctttgaagcggcaacgcagatggaattctgagaacatcaaggtt
cctgaacagcaaagctcaaatttgacacccaccaccacacctaaggatgggtttcagcct
gctcctttgagacgcaacttctcccgttctgaatcctctgttagtgaggaggcacccaag
gaacgtgttgttccaccatcacaaaaacctttgaccaattctctcagaattgatcgtttt
ctgcgtccttttactctgaaagctgtccaagaactcctgggcaaaaccgggagtgtcacc
agtttttggatggatcatatcaaaacccattgctatgttacgtattcatctgtggaagaa
gccacggagacacggaatgctgtttataacctacaatggccaccaaatggtggacgcctt
ttagtggccgagtttgttgatcctcaggaagtgaaaatgcgggtggatgctcctcctcag
tctccatctacacctgtcactcctagtgctgctgcacctgctcctcccaccctgcagcca
caaccctctcctcgtcaacaggcttccaggcagcaacttccacccccaccttcccttcca
cctcctccaccactatctaacccaccacatgccagggaacgacttgatcttcctccacca
cctccacttcctgagaagcatgacccacccattgttactctggatgacctcttccggaaa
accaaaacagctcctcgaatctactacttaccgttattggaagagcaagttgcagcaaaa
cttgcagaacgtggaaaaaacaccaagcaatag
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