Populus euphratica (Euphrates poplar): 105112618
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Entry
105112618 CDS
T05872
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105112618
03041 Spliceosome [BR:
peu03041
]
105112618
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105112618
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105112618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
105112618
NCBI-ProteinID:
XP_011006667
UniProt:
A0AAJ6T9E9
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MYHQHHHPALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAG
PLAGCKLIRKDKSSYGFVDYHDRSSAALAIMILHGRQLYGEALKVNWAYASGQREDTSGH
FHIFVGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAIN
DLTGKWLGNRQIRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPA
YTTVYVGNLSHVVTQAELHSNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGN
GKIVCGKPMKCSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLAL
SQAAASGLSGQALVQLTGQHGLSAASMGLSSSGSQALYDGYPNSLAAAQQLMYYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcagcatcaccatcccgccctcgtcgccgctgccatgtctcagatggagccc
atccctggtgggaatctgcctcctggtttcgattcttcttcttgtcgcagcgtttatgtt
ggaaatattcatgtcaacgtcactgacaaacttcttgctgaagttttcgccactgccggc
cctcttgctggatgcaaactcatcaggaaggataagtcatcatacggttttgtggactac
catgaccgatcatctgcagcacttgcaataatgatattgcatggacgccaactttacggg
gaggcgcttaaagtgaattgggcatatgccagtggccaaagagaggacacatcagggcat
ttccacatatttgttggtgatttgagtccagaggttactgatgcaactttatatgcgtgc
ttctcagtctttcctagttgctctgatgcaagggtcatgtgggatcacaaaactggacgc
tcaaaaggatatggctttgtttcattccgtaatcagcaggaggcacaaagtgccattaat
gacttaactggtaaatggcttggaaacaggcagataagatgcaattgggcaactaaaggt
gttggttccaatgaagataagcaaaacagtgataaccaaaatgcagttgtacttactaat
ggatcttcagcaggaagtcaggaaaacactaatgaggaggctcctgaaaacaatcctgca
tatactactgtctatgtcggcaatctttctcatgtggttactcaagctgagctgcatagt
aattttcacgcccttggggctggagtaattgaggaggtgcgtgtccagagagataaaggt
tttggatttgttagatacaacactcatgaagaagcagccttcgccattcaaatgggcaat
ggaaagatagtttgtggaaagcccatgaagtgctcatggggtagcaagccaacccctcct
ggaacagcttcaaatccattgccacctcctgctcaaccatatcagatcgctccatcaact
ggtataaaccaaggctactctgcagctgatttgttggcctatcagcgccaacttgcctta
agccaggcagctgcatctggcctttcaggccaagctcttgtacagctgaccggacaacat
ggcctatctgcagcttcaatgggcttgagctccagtgggtcccaagctctgtatgatgga
tatcctaacagtttggcagcagctcagcagctgatgtattaccgttaa
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