Populus euphratica (Euphrates poplar): 105113042
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Entry
105113042 CDS
T05872
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105113042
09123 Folding, sorting and degradation
03018 RNA degradation
105113042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105113042
03041 Spliceosome [BR:
peu03041
]
105113042
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105113042
mRNA degradation factors
5'-3' decay
Lsm complex
105113042
Spliceosome [BR:
peu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105113042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
105113042
NCBI-ProteinID:
XP_011007336
UniProt:
A0AAJ6X6M3
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaggaaagaaacagtattggatttggctaagtttgtggacaagggtgttcaa
gtcaagctcactggtggtagacaagtgactgggactttgaagggatatgatcaattgcta
aaccttgtcctggatgaagcagtagaatttctaagagatgctgatgatccactaaagacc
actgaccagacaaggcgccttggcctgattgtttgcaggggaactgcagtgatgctggtg
tcacctactgatggtacagatgagattgccaaccctttcgtccagccagatggagcctag
DBGET
integrated database retrieval system
