Populus euphratica (Euphrates poplar): 105113168
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Entry
105113168 CDS
T05872
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
peu01009
]
105113168
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105113168
03041 Spliceosome [BR:
peu03041
]
105113168
Protein phosphatases and associated proteins [BR:
peu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105113168
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105113168
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105113168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
Med9
DUF4407
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
105113168
NCBI-ProteinID:
XP_011007519
UniProt:
A0AAJ6X6T7
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MELKVSPLKTGGLSPADCISDPEEKEVSDEDDDDRNHKHRRRETRSQSLERDSLEPVSTR
PYRKHNKHFENGHPFRENESQARETWKNYNSVSLEKDFATKFERIRPDLMSLPRMPVDLN
QRIRLNQTISGDPGPSRGRGRESGSWSQRDSRFSSVGIASQMAHLGPSLFAGRGLANVSN
VQSASWNAFGLMPRMSNGGLDTLHPIGLQGTLRPAVNSSLNMGIPHQRCRDFEERGFCLR
GDMCPLEHGVNRIVVEDVQSLSQFNLPVSLPRAQLPGTTSGLGAVPTVGAPPATLMNSKG
MHGKSNKPGIVDDGLGLNGACSGSVSVSGGDLYDPDQPLWNDNGPETSSTLLAPHSPKFG
ETESMISVDPSDHTHARSRDGADNECPIRSTGTAVGFQGMNSSVWGRIGALNNRLDVKEK
IDSTVSMSSYMESESKEDQGALDNVHGTSRQGKRTNFDDCGTKTMDSPAKIHSDTMRHTR
KPSQKALRTLFVNGIPHKSNKRDALLSHFQKFGAVIDIYIPLNSERAFIQFSKREEAEAA
LRAPDAVMGNRFIRLWWANRDSIPDDATSRGVPATSVLPHLSIGNSGKDNLQLAISKTTV
VPTSDTSMPATDHHKVHITNGPEVSPPVQKKLESLEQLKEELRKKQELLDQKRNDFRRQL
HKLEKQATGVKGEVAAEPASKRQKTGIASDVAKATTTRPADPGAGVTSPHAGIVDKNKRM
ENIVSSSTKTSTVMVLQESAGSKQSIHPLAPVGPPFLMNKYKLDNRPTAFRVISPLPAGL
ANVAALKEHFSSYGYLSSVELEDEPGDYDGDGNGDGSDTVKSCSARVTFATRRSAERAFL
NGKCWQGKNLKFEWLMSSTSSVGENSSAPKCLVHADVQPVKKLARMDSQEVSASGNGEPE
DPERNNGAGPTELDKCCSASISGEVEESPKREPSPKSISPEKESTETDPSQTAMSEKESP
EGIFCLTMG
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtttcgccactaaagacaggtggtctttctcctgctgattgcattagc
gatcctgaggagaaggaagtcagtgatgaggatgatgatgatcgcaaccataagcatcgt
agacgagagacgcgttctcaatctttggagagagattctctggaaccagtttctacaagg
ccatacaggaagcataacaaacactttgaaaatgggcatcctttccgggaaaatgaatct
caagctcgtgaaacctggaaaaattataactctgtttctcttgagaaggactttgccaca
aagtttgaaagaatacgacctgacctaatgtcattaccccgaatgcctgtggatttgaat
caaagaatccggttaaaccaaaccatttctggagatcctggtcctagcaggggaagagga
agggagtctggttcttggagccaacgtgattctaggttcagctcagttggcattgcttct
caaatggctcacttggggccaagcctctttgccgggagggggttggcaaatgtttcaaat
gtgcagagtgcatcctggaatgcttttggtttaatgccaagaatgtcaaatggtggcctg
gatacactccatcccattgggttgcaaggaacgctcagaccagcagtaaattcttcattg
aacatgggcattcctcaccagaggtgtagagattttgaggagcgtggattttgtttaaga
ggggacatgtgtccattggagcatggtgtcaatcgcatcgtggttgaagatgttcagagc
ctttcacagtttaatctccctgtttcacttccacgtgcccaactacctggaacaacttct
ggactgggggctgtgccaacagttggtgcccctccagccacattgatgaatagcaaagga
atgcatggaaaaagtaacaagcctggaatagttgatgatggcttgggtctgaacggtgca
tgtagtggttctgttagtgtgagtggaggagacttgtatgacccagatcagcccctgtgg
aatgacaatggtcctgaaacttctagtacacttttagcaccacattcacctaaatttggt
gaaactgaatccatgataagtgtggatccttctgatcacactcatgccaggtcacgtgat
ggtgctgataatgaatgcccgattagaagcactgggactgctgtgggttttcaaggcatg
aattcttctgtttggggtagaattggggctttgaacaatagactagatgtgaaagagaaa
atcgattccacagtaagtatgtcaagttacatggagagtgaatccaaggaagatcagggt
gcattagacaatgttcatggtacttctcgtcaaggaaagcgcactaattttgatgattgt
ggaacaaaaaccatggattcacctgccaagatacatagcgataccatgcgtcacacgcgg
aaaccatctcaaaaagcactgcgaacactatttgtgaacggcattccgcataaaagcaac
aaaagagacgctctactttctcattttcaaaaatttggtgcggttattgacatttatatt
ccattgaacagtgagcgagcatttattcagttttctaaaagggaagaggcagaagctgct
ctaagggcacctgatgctgtaatgggcaatcgttttatcagactgtggtgggctaatcgt
gatagcatacctgatgatgctacttcccggggtgttcctgctacttcagttctaccccat
ctgtctattggtaacagtggaaaggataatcttcagttggctatttcaaagactactgta
gtccctacctctgatacttctatgcccgccactgaccaccataaggtccacatcacaaat
ggtccagaggtttctcctcctgtgcagaagaagctagagagtttagaacaattgaaggag
gaacttcgcaagaaacaggagctgctggatcagaagcgaaatgactttcggcgtcagttg
cacaaacttgagaaacaagctacaggagtcaagggtgaggtagcagcggagcctgcttct
aagagacaaaaaactggaatagcatcagatgttgccaaagctactactacgaggcctgct
gatccaggtgctggtgtcacatcaccacatgctgggatagtggataagaacaaaagaatg
gagaatattgtgtcttctagtaccaaaacaagtacagtgatggttctgcaggagtctgct
ggctcaaagcaatcaattcatccattagcacctgttgggcctccttttttgatgaataaa
tacaagctggacaaccgacccacagcgtttagagttatttcacctttaccagctggtttg
gcaaatgttgctgctttgaaggaacacttctcatcatatggttatctttcttccgtggag
ctagaagatgagcctggtgattacgatggtgatggcaatggtgatggatcagatacagta
aaaagttgttcagctcgtgtgacttttgctactcgccgatctgctgagagagcattcctt
aatggtaaatgttggcaaggcaagaatttgaagtttgagtggctgatgtctagcacttct
agcgttggagaaaattcatctgctcccaagtgtcttgtacatgctgatgtccagcctgtt
aaaaaactagctcgtatggattcccaggaagtttctgcatcaggaaatggagaacctgaa
gatccagagagaaataatggtgctggcccaacagagttggataagtgctgttcagcctca
atttcaggtgaggtagaggagtcaccaaaacgtgagcctagtccgaagtcaatatctcct
gagaaagagtcaacagaaacggaccctagtcaaactgcaatgtcagagaaagagagcccc
gaaggcattttctgtttgacgatgggttga
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