Populus euphratica (Euphrates poplar): 105113532
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Entry
105113532 CDS
T05872
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105113532
Enzymes [BR:
peu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105113532
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Dioxygenase_C
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
105113532
NCBI-ProteinID:
XP_011008036
UniProt:
A0AAJ6TC32
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MGKGNVRLINQGPYVMLDNDLVRLTILKPQGYLTGIKYGGMDNILDLHSSESNRGYWDLN
WNLPGGKDRYQSVNGAEYSVIYNSNDKLEISFRSTYDPSNKGTKLPLSIDIRYILNSGVS
GFYCYAIYERPAGSPAFDLVQTRMVFKLRRDKFHYMAITDEKQRVMPMPEDLLPGRGKQL
IVPESILLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWIGSGPVIGFWVIFPSHEFRNGG
PTKQNLTVHTGPTCLAMFHGTHYIGDAIVAQFQEGEAWRKVFGPFFVYLNSTSKVSDAYN
LWIDAKKQRLHEEATWPYEFVSSPYYLNAEERGSATGRLFVQERFVSKSLIPAKNAHVGL
STARAEGAWQTESKDYQFWVQTDSNGNFTIKNVIPGVYGFHGWVPGFIGDFLDNTLVTIS
EGSETQLGNLTYVPLRDGPTIWEIGFPDRTAIGFYVPDVNPMYVNKLFVNSPEKFRQYGL
WDRYTDVHPESDQTFTIGISDPKKDWFFAHVDRRVADKYIPSTWTIKFLLNSIKKGIYKL
RLAIASANRSDLQVYLNDMDQEHMVFQVMNLGAENAICRHGIHGLYRLFCIDIPSSLLLD
GDNSMFLVQARGGDALCGILYDYLRLEAPASPANSKRREELESFQFDYHV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggggaacgtgaggttgatcaaccaaggtccatacgtcatgctagacaatgat
ttggtgaggctcacaatattgaaacctcaagggtatttaacaggaattaagtatggagga
atggataacattcttgatcttcattcaagtgaatctaatagaggatattgggacttgaac
tggaacttgccaggaggaaaggatagatatcaatcggtaaatggagctgaatatagtgtg
atttataacagtaatgacaagttagagatttcatttaggagtacttacgatccttcaaat
aaaggcaccaaactgcctctcagtattgacataagatacatattgaatagcggtgtttca
ggattctactgctatgcaatctacgagcgtcctgcaggatctcctgcttttgatcttgtt
cagacaaggatggtctttaagttgcgacgcgataagtttcattacatggcaatcactgat
gaaaagcaaagggtaatgccgatgcctgaagacctacttccaggcagaggaaagcagcta
attgtgcctgagtctattcttttggtgaatcccattaatcctgatcttaaaggagaggtt
gatgacaaataccagtattcaatggacaataaagatggtggagtccatggatggattggt
tctggccccgttattggattctgggtcatcttccctagtcatgaatttcgaaatggtggt
cctactaagcaaaatcttactgtgcatactggtccaacttgcctagctatgtttcatgga
actcactatatcggagatgctatagtagctcaatttcaagagggtgaggcatggaggaag
gtttttggccccttctttgtgtaccttaattcaacctcgaaagtttcagatgcatacaat
ttatggattgatgctaaaaaacagaggctgcatgaggaggcaacatggccatatgaattt
gtgtcatcgccttactaccttaatgctgaagaacgcggttctgctacaggaagactcttt
gtccaagaaaggtttgtttctaagtctctgataccagctaaaaatgcacatgttggtcta
tcaactgcaagagctgaaggagcctggcaaacagaaagcaaggactatcagttctgggtt
caaacagattcaaatggaaatttcaccatcaagaatgttattcccggggtgtatggattc
catggctgggttcctggtttcatcggtgacttcctagacaatacacttgttaccatatct
gaaggatcagaaacacaacttggcaatttgacatatgttcccctcagagacgggccaaca
atatgggaaattggctttcctgatcgtacagctatcggtttctatgttcctgatgtcaat
cccatgtatgtgaacaagctatttgtaaacagccctgaaaagttcaggcaatatggattg
tgggacagatacacagatgtgcatcctgaatctgaccagactttcacaataggcatcagt
gatccaaaaaaagattggttcttcgctcatgtagacagaagggtagcagataagtatatt
ccgtcaacatggacaattaaatttcttctcaactcaataaaaaaggggatttacaagctg
agattggccatcgcctcagcaaaccgttctgacctccaggtgtatctcaatgatatggat
caagaacatatggtcttccaagtgatgaatttgggagcagagaatgcaatttgtcggcat
ggaattcatggattatatcggctattttgcattgatattccctcatctttattattagat
ggagataactccatgtttctagtacaggccagaggtggagatgcactttgtggaatttta
tatgattatttaaggctagaagctccagcatctccagcaaattcaaagcggcgggaagaa
ctagaatcatttcagtttgactatcatgtttaa
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