Populus euphratica (Euphrates poplar): 105113850
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Entry
105113850 CDS
T05872
Name
(RefSeq) Werner syndrome ATP-dependent helicase-like isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105113850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105113850
03400 DNA repair and recombination proteins [BR:
peu03400
]
105113850
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105113850
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
105113850
DNA repair and recombination proteins [BR:
peu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
105113850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Cas3-like_C_2
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
105113850
NCBI-ProteinID:
XP_011008499
UniProt:
A0AAJ6TCX0
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MLSTLKQHFGYANFRAYQKEVIDQILDKRDCLAVMATGSGKSLCYQVPPLLLEKTAVVIS
PLISLMQDQVMSLKQRGIRAEFLGSAQTDGSVHTKAQTGHFHLLFMTPEKACSTPLSFWL
KLLEAGICLFAVDEAHCISEWGHDFRVEYKQLGKLRDVLLEVPFVALTATATEKVRIDII
NSLKMNDPYVAVGSFDRKNLFYGVKHFNRSLPFVDELVQEISKYARKAGSTIIYCTTIKD
VEQIHKSLQEAGIKTGIYHGQMSSKAREESHRSFVRDELLVMVATIAFGMGIDKPNIRQV
IHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRADFAKADFYCGGLRTENQRRAVMESL
MAAQHYCSLTTCRRKFLLNYFGEKFSAEKCGNCDNCMVSKRERDMSKESFLLMSCIQSCE
GNWGLNMPVDVLRGSRAKKILNSHFDKLPFHGLGKDYSSNWWKSLAYQLISHGYLMETFR
DTYKFVRVSPKGKQYIQSARPDHQPALILPLTDEMVGDEEQQCTTGGVGELNSMATLECE
QLSEAEARIFHMLLDERTKLAKSIGTAPYAVCGDQTIKKIALVRPSTKARLANIDGVNQH
LVVRHGDYLLQTIRDLSQELNLSLDGGANLQTANSRKANQVPNHKKLTPAKLDAWKMWHE
NGLPIQKIANFPGRSAPIKEGTVVEYLLEAAQGGLQIEWTRLCGEVGLSRERLSEIEGAI
SKVGSREKLKRIKDELPEDISYAHIKICLAMQNCGFSPEVTPPSYLDISKADEFVESESG
MVSTDTSCLDTVHEVEISVKIMATHCCSDHNEETSSLMVRIAQDHEVHPINDANVLSPRK
RQKVDIPEESSTALEATESSILDWLKNYDEGVFMRDILEHFNGSKDELVIDLLSSLESDF
VIFKKNDLYMLL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgttatccacgcttaagcaacactttgggtatgcgaatttcagggcttaccagaaggag
gtgatcgatcagattctggacaagagggactgtttagcggtcatggccactggcagcgga
aagtctttatgctaccaggttcctcctttgcttcttgaaaagactgccgtagtcataagc
ccccttatttctttgatgcaagatcaggttatgagtttgaaacaacgcggaatcagagct
gagtttcttggaagtgctcagactgatggttctgtccataccaaagctcagactggtcat
tttcatttattgttcatgacacctgaaaaggcttgctccacccctctcagcttctggttg
aaattgctagaggcaggaatttgtctcttcgctgttgatgaagctcattgcatctcagag
tggggccatgatttcagggtggaatacaagcagttaggcaagttacgtgatgttcttttg
gaagttccatttgttgcattaactgcaactgctactgaaaaggttagaatagacatcatc
aattctttgaagatgaacgatccttatgttgctgttggctcatttgatcgtaaaaatctc
ttctacggtgtcaaacatttcaatcgcagtcttccatttgtggatgagcttgtgcaagaa
atatcaaaatatgcaaggaaggccggatcaactattatttactgtacaacaataaaagat
gttgagcagattcacaagtcactgcaagaggcaggaattaagaccggaatatatcatggt
caaatgagcagcaaagctcgtgaggagtcccacagatcgtttgtaagagatgaactgctg
gtcatggttgctactattgcctttggcatgggcattgataagccaaacataaggcaggtg
atacattatggttgtccaaagagtatagaatcttattatcaggaaagtgggcgatgtggg
agagatggtattccttctgtctgttggctatattatacaagagctgactttgcaaaagct
gacttctattgtggaggattaagaacagaaaaccaaagaagggctgttatggagtcattg
atggctgcgcaacactactgctcactaacaacatgcagaagaaagttcttgctcaattat
ttcggtgaaaaattttcagccgagaaatgtggaaattgtgataattgcatggtctcaaag
agggagcgtgacatgtctaaggaatcatttcttttaatgtcctgcattcaatcatgtgag
ggtaactggggcctcaatatgcctgtagatgttcttcgtggatccagggcaaaaaaaatt
cttaattctcattttgacaagctaccatttcatggacttgggaaagactactcgtcaaat
tggtggaaatcactagcttaccaattaatttctcacggttatctgatggagacttttaga
gatacatataaatttgtaagagtaagtccaaaagggaagcaatatattcagtctgctaga
cctgatcaccaaccagctctaatattaccattgactgatgaaatggttggggatgaagaa
caacaatgcacaacaggcggggttggagagttgaatagtatggcaactttagaatgtgaa
caattgtcagaggctgaagcacgaatctttcacatgcttttggatgagagaaccaagctt
gctaaaagcattgggactgctccatatgctgtatgtggtgatcaaacaataaaaaaaatt
gctttggtgagaccatctaccaaagcaaggttggccaacattgatggtgtcaaccagcat
cttgttgtgagacatggcgattatcttcttcaaactattagggatctgtcacaagaactt
aacctttccttggacgggggagcaaacttgcagactgctaattcaagaaaagccaatcaa
gtaccaaatcacaagaaattaaccccagcaaagttagatgcttggaaaatgtggcatgaa
aatggtctaccaattcaaaaaatcgcgaatttccctggtagatcagctcctataaaagaa
ggaactgtagttgaatatcttctagaagctgcacaaggaggactccagattgaatggacc
agattgtgtggtgaagttggactttcacgtgaaagattgtcagaaattgagggtgcaatc
tcaaaggttggctctagggaaaagttgaagcgcattaaagatgaattaccagaagatata
agctacgcacacatcaagatctgtctggcaatgcaaaactgtgggttttcacctgaagtg
actccacctagctaccttgacatatcgaaggctgatgaatttgtggaaagtgagtctgga
atggtttccactgataccagctgcctggacacggttcatgaggttgaaatatcagtcaag
attatggctactcattgttgctcagatcataatgaagaaacttcctcccttatggtcaga
attgcacaggaccatgaggttcatcctatcaatgatgcaaatgtactttccccgaggaaa
cgtcaaaaggtagatatacctgaagaaagctcaactgcattggaagctacggagagttcc
atactggattggctcaagaactatgatgaaggggttttcatgagagatattttggagcat
ttcaacgggtcaaaagatgaattggtgattgatttactaagtagccttgaaagcgacttt
gtaatatttaagaagaatgatttgtatatgcttttgtaa
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