Populus euphratica (Euphrates poplar): 105113895
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Entry
105113895 CDS
T05872
Name
(RefSeq) uncharacterized protein LOC105113895
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105113895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105113895
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105113895
mRNA degradation factors
5'-3' decay
Decapping complex
105113895
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105113895
NCBI-ProteinID:
XP_011008549
UniProt:
A0AAJ6X7U3
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Position
Unknown
AA seq
788 aa
AA seq
DB search
MERSDGKDFKEFTESSSGALFDASQYEFFGQHAVEEVELGGLEDEGENLLLGPTNDEYRL
FDRDEGVCLGSLSEIDDLASTFAKLNRVVTGPRNPGVIGDRGSGSFSRESSSATDWAQDG
EFTSWLDQQMLNAENSQDSKRWSSQPQPSSACFSESKPLYRTSSYPQQPQQLQHFSSEPI
PVPKSNFTSFPPPGCSPHHLNVASRAGGLQSHLSAPNLSPLSNSNLHLAGLQHGLHYGGN
LAQITSPGLSFNNRPQKHWVNHAGLLHVDQSRLLQSILQQQLSHQNGLLSSQLMSPQQQL
QQQRLHPSVQPSLAHFAAMQSQLFNAHPSSLHMREQKHKSSQRNRRFSQGSDTSSQKSDS
GWVQFRSKHMTADEIESILKMQHAATHSNDPYIDDYYHQASLAKRSTGLRTKNNFCPSHL
KELPSRSRNSADQHSHLHFDALGKMPLPSIRRLHPLLEVDPPGSGDGNSEQMSERPLEQE
PMLAARITIEDSLSLLLDVDDIDRFLQCNQPQDGGAQLRRRRQNLLEGLAASLQLVDPLG
QTGKTAGLASKDDIVFLRLVSLPKGRKLICKFLQLLYPGSELTRVVCMAIFRHLRFLFGG
IPSDTGAADTTTNLTKTVSACVSGMDLHALSACLVAIVCSSEQPPFRPLGSPAGDGATVI
LKCLLERASKLLHGPQASSNCGMPNFALWQASFDEFFSLLMKYCLIKYDTIWQSVYAKTP
PSAEGIDSEVRAATKREMPVELLRACLPHTNERQMERLRHFGQQRNTITGLNAHPGNSGH
VNSESVKS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatctgatggcaaggatttcaaagaattcactgaatcttcttcaggtgcactc
tttgatgcttcacagtacgaattttttggtcaacatgctgtggaagaagtggaattgggt
ggtttagaagatgagggtgagaatcttttgctcgggcccaccaatgatgagtaccgtttg
tttgatagagatgaaggtgtatgtttaggatctttatctgaaattgatgatctggcaagt
acttttgctaagttgaaccgagttgtaactggacccaggaatccaggagttattggtgac
agaggatctggatccttttcgagggaaagctcatctgccactgattgggcacaagatgga
gagtttacgagttggttagatcaacaaatgttaaatgcagaaaattctcaggatagcaag
agatggtcatcacagccccaaccttcttctgcttgtttctcagaatcaaaacctttgtac
agaacttcctcatatccccagcagccacaacagcttcagcacttctcaagtgaaccaatt
cctgtaccgaaatcaaatttcacatctttccctcctcctggttgttcgccacaccacctt
aatgttgcttcccgtgctggtggactgcagtcacacttgtctgccccgaatctgtctcct
ttgtccaactctaatcttcatctggctggtttacagcatgggttacattatggtggaaat
ctggcccagatcacgtctcctggcctttcttttaataacaggccacaaaaacattgggtt
aatcatgctggcttattacatgtagatcagtctaggctcttacagagtatactgcaacaa
caattatcgcatcaaaatggcctattgtcttcccaattgatgtcaccacaacagcaattg
caacagcagagactgcacccttcagttcaaccatctttggctcattttgcagcaatgcaa
tctcaactctttaatgcacatccttcatccttacatatgagggaacaaaaacataaatca
tcccaaagaaaccggcgcttttcacaaggctctgacactagtagtcagaaaagtgatagt
ggctgggtgcaattccgatccaagcatatgacagctgatgaaattgagagtattctgaaa
atgcagcatgctgccactcatagcaatgacccatatatagatgattactaccaccaagct
tctcttgccaaaagatctaccgggttgagaactaaaaacaatttctgcccgtctcacttg
aaggagctaccttctcgatctcgtaacagtgcagaccagcattctcatctccattttgat
gctctcgggaagatgcccctcccttccatacgcaggcttcatccccttcttgaagttgat
cctcctggttctggtgatggaaactctgaacaaatgtctgagaggcctttggaacaggaa
cctatgcttgcagctagaatcaccattgaagatagcctgtctcttcttcttgatgtagat
gatattgatcgtttcctgcagtgtaatcagccccaagatggtggggctcagctcaggcgt
aggcggcagaacttgcttgaaggattggcagcttcacttcagcttgttgacccacttggc
caaactggcaaaactgctggacttgcctcaaaggatgacattgtgttcctgcggttagta
tcacttcccaagggtcgaaagctcatctgcaagtttcttcagcttctatatcctgggagt
gaactcacccgtgttgtctgcatggctattttccgtcacttgagatttttgtttggtggc
attccctcagatacgggagcagctgacacaactacaaatctcacaaagacagtttctgca
tgtgtaagtggcatggatcttcatgcattgagtgcttgccttgtagccatagtttgttct
tcagagcagccaccatttcggcctcttggtagccctgctggggatggagccacagttatt
ttgaagtgtcttcttgaaagagctagtaaactattacatggtccccaggcttcttccaac
tgtggtatgcccaattttgctctctggcaggcatcatttgatgaattttttagtcttctt
atgaagtactgcctgattaaatatgacactatatggcaatcagtctatgcaaagacacca
cctagcgcagaaggtattgattcagaggtgcgtgcagcaacaaaacgagaaatgcctgtt
gagcttttaagagcttgccttcctcatacgaatgaacgccagatggaacgtttaagacat
tttgggcagcaacgcaataccattactggcctgaatgcacatccagggaatagtggtcac
gtaaactctgaatcagtgaagagttga
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