Populus euphratica (Euphrates poplar): 105113961
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Entry
105113961 CDS
T05872
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105113961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peu03021
]
105113961
Transcription machinery [BR:
peu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105113961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105113961
NCBI-ProteinID:
XP_011008636
UniProt:
A0AAJ6TD90
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKAMAENRGKCFDCGAIVTRLIREYN
VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL
EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM
KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGKGGRKKANGDDDEGNVSDK
GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV
AIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAED
DDDDDDMDDDSSPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNA
DDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKAMPSSSKTGPTSGATGPVTEE
EIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDKR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgatcttcagttacagccgtcgtgtagtggctgtggcagcaccacagatttg
tacggaagcaattgcaagcatatgacgttgtgcttgacttgtggcaaagcaatggcggag
aatcgcggcaaatgctttgattgtggcgctattgttactcgcctgattcgagagtataat
gtgagggcgagtacgagtagcgaaaagaattattttataggaagatttgtgactggattg
ccaggtttttcgaagaaaaaaaatgccgagaataaatggtctttgctgaaagaaggaatt
catggtcgccaaattactgatactttgcgggagaagtttaagaataagccatggcttttg
gaggatgaaactgggcagtttcagtatcagggtcatcttgaagggtcgcaatcggcgact
tattatctgttgatgatgtctgggaaagagtttgttgctattcctgctggttcttggtac
aactttaacaaggttgcgcactataagcaacttaccttggaggaagcggaagagaagatg
aagaataggaggaagactgcagatggatatgaaaggtggatgatgaaagctgcacataat
ggagctgctgcatttggtgaggtggagaagccagatgataaggatggtgtttcagctggt
ggaaagggaggtcggaaaaaagcaaacggtgatgatgatgagggcaatgtgtctgacaag
ggagaggaggacgaggaggaagaggcgggaaggaagagtaggcttggactcaataaaggg
ggtggtgatgatgatgaagaaggtccaagaggaggtgatcttgatatggatgatgatgat
attgagaagggcgatgattgggagcacgaagaaattttcactgatgatgatgaagctgtt
gccattgatcctgaggaacgggaagatttagcccctgaagttcctgctcctcctgaaatc
aagcaggatgaagaggacgaggatgaggagaatgaggaaggaggactgagcaaatctggg
aaagagttgaagaagctacttgggaaagcaaatggtctgaatgagtcagatgcagaagat
gacgatgacgacgacgatatggatgatgatagttctcctgtactggctccaaagcagaag
gatgctgtgccaaaggaggaacctgctgacaatagtcctgcaaaaccaacaccacctggt
tctgctaagggaaccccttctacctccaagtcagctaaggggaaaagaaaactgaatgct
gatgatgcaaaaacttctaatggtgcacctgtgaagaaggtgaagacagaaaatgaagta
aaacctaccgtgaaagaagaaagctctcctgctactaaaggtactgcaactcctaaagca
atgccatcatcgtcaaaaaccgggccaacatctggggcaactggccctgtcactgaggaa
gagattagggctgttttgttgcaaaatggacccgtaactacacaggatctggtggctagg
tttaaatcacgactaaggactcctgaggacaagaaggcttttgcggatattctaaggaga
atttctaagattcagaagaccagtggatctaactttgttgtgttgagggacaaacgataa
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