Populus euphratica (Euphrates poplar): 105114014
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Entry
105114014 CDS
T05872
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105114014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105114014
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
105114014
SWR1 complex
105114014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Myb_DNA-bind_6
Myb_DNA-binding
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
105114014
NCBI-ProteinID:
XP_011008702
UniProt:
A0AAJ6X7M4
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKLKEEEQRLRKVAVNISKDVKKFWVKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVEKPPEQYFAPEKPSIADRVGDDANAPLQVD
DAHCLEAQVDTADNDDEYDVHSEDEVEDDEHTIEEDEALITKEERQEELEALHNEMDIPL
EELLKHYTVEKGGRESSENGAKPCANGEEHCESKGEDISSACEMEISSSPVNAGRRCGEN
NGALPIPDNNLLEIGAYETRNQLSISEDPAREHVPYDFNDEQEDGDFDLAAEEEKDDETT
LLEEEEMAKADSNNPIDEILLLQKESEIPLEELLARYTKEPNSEVSEDESEYAPVLSDNM
SNSPCHEEELKQLDNSMDGMVEHGEHPSVEEQEKGNEEISEEGRESESKIADAAAAARSA
QPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTI
ALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKCKRQGWLK
PNFFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLT
GTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGMVEGQERVNKEVVDRLHNVLR
PFILRRLKRDVEKQLPMKLEHVIYCRLSRRQRNLYEDFIASSETQATLATANFFGMISII
MQLRKVCNHPDLFEGRPIISSFDMAGMDIQLSSSVCSMFSPGPFSSVDLCALGLVFTHLD
FNMVSWESDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEETRKSLLEGR
LREMKQRAASIAWWNSLRCRKKPIYSTTLRELLTVKHPIYDIHRQKVEGLSSLCSSKLGD
VVLSPIERFQKMTDLVESFMFAIPAARSPAPIFWCSQTRTPVFLHSTYEEKCSEMLLPLL
SPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEAF
INLYGYTYMRLDGSTQPEDRQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDS
DWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT
EFFKKLDPMELFSGHKTLQIKNMQREKNNNNGNEVSLSNADVEAALKYAEDEADYMALKK
VEQEEAVDNQEFTEDAIGRLEDDEFVNDDDMKADEPTDHEMTTCCKEGEVNLDENDCIEE
RAVAFTGNKDDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKA
ALESQVRFQETEWELDRIEKYKDEMEAEIDDDEEPLVYERWDADFATEAYRQQVEALTQH
QLMEEKEAEAEAEANEKESADGHLDAMVRCKVPRNPKSKSKKKPKKAKFKSLKKESLTSE
LKHMKVEASIETLSADDDDEDDDDDDVIYPDDGTYSDAMSPYSSVQRKRKKAELAIDIDK
KRSRKNSKKFKKAPETCPFDVDSDLSGKQHGRSMELKPYDVVSDLEQKPAGRSKVGGKIS
ISTMPVKRVLMIKPEKLKKGNVWSRDCVPPPDSWLPQEDAILCAVVHEYGPHWSLVSETL
YGMAAGGFYRGRYRHPVHCCERFRELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDN
IRMLLNVAAEQPDHELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSV
NQLPSNSSKESAKRMKFTNLGHSSKLLAAALHDTSSRRPDDKVSYSNLSEVAPAIVEQLE
ITLEFQKEEDDSLIQFPPVISLSIPGSGPLTSVNKDRAEAQHLRASTSIAENRFRDAARA
CVEGDLGWVSSTAPANDFKLRLASKTQSLGKHKLAVSESTKPPRSKMKKTLIEHSEGHLF
AEPVSQPLPVLSSMDPNLRFDLPPTAIQDGKDEYSISCIEEELSAEMGTLDAVPHDYVLG
LTSGLDDFSSLPEFTDIG
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaaggtccaaggtctaagcttgatcacgagacgagagctcggcgtcaaaag
gcactggaagctccgagagaaccccgtcgcccgaaaactcactgggatcatgttttggag
gaaatggtttggttgtcgaaggattttgagtcggagaggaaatggaaattggcgcaagca
aagaaagtggctttaagagcaagcaagggcatgttggatcaggccaccagaggagaaaag
aaattgaaggaagaggaacagcggttgcgaaaagtagcggtcaatatttcaaaggatgta
aagaagttctgggttaaaatagaaaagctggtgctttacaagcatcagatggagcttgac
gagaagaagaaaaaggcacttgataagcagcttgagtttcttctaggacaaactgagagg
tactctacaatgctggcagaaaatctagtggagaaaccaccagagcaatattttgcacca
gaaaaaccgagtattgcagatagggtaggagatgatgctaatgcacccttgcaagtcgat
gatgctcattgtttagaggcccaagtggacactgcagacaatgacgatgagtatgatgtg
cactctgaagatgaagtggaggatgatgagcatactattgaggaagatgaggctcttata
accaaagaagaaaggcaagaagaattggaagctctgcacaatgaaatggatattcccctt
gaggagctactcaagcattacactgtagagaaaggtggcagggaaagtagtgaaaatgga
gccaagccatgtgcaaatggggaagaacattgtgagagcaaaggagaagatatttcttct
gcttgtgagatggagataagcagctcacctgttaatgctggtcgtcgttgtggtgaaaat
aatggtgccttgcccattccagacaacaatttattggaaattggggcgtatgaaaccaga
aatcagttaagtatctccgaggatccagccagagaacatgtgccatatgatttcaatgac
gaacaggaagatggtgattttgatcttgccgctgaggaagaaaaggatgatgagacaacc
ttgctggaggaggaagagatggcaaaagcagattcaaacaatcccatagatgagattttg
ttactgcaaaaggagagtgaaattcctttggaagaattgcttgcaaggtatacaaaggag
ccaaacagtgaagtttcagaggatgaatctgaatacgcaccagtattatcagacaatatg
tcaaattccccatgccatgaagaagaactgaagcagctggataactcaatggatggaatg
gttgaacatggggaacatccttctgttgaagaacaagagaagggaaatgaagaaatttca
gaagaaggaagggagagtgaaagtaagattgctgatgctgctgctgctgcaagatctgca
caaccaacaggcaatacattctcgacaaccaaagtgcgcacaaaattcccttttcttctc
aagtatcctcttcgtgaatatcaacatataggcctcgattggcttgttacaatgtatgaa
aaaagattaaatgggattctagctgatgaaatggggcttggaaagacgatcatgactatt
gctttgcttgcacacctagcatgtgaaaagggaatatggggtcctcatctgattgtggtt
ccgacaagtgtcatgcttaactgggaaacagagtttcttaaatggtgtcctgccttcaag
attttaacatattttggcagtgcaaaagagcgtaaatgcaagaggcaaggttggctgaaa
ccaaatttcttccatgtatgcataacaacttacagactggttatacaggattcaaaagtc
ttcaagaggaagaaatggaagtatttgattttggatgaagctcatctgattaaaaattgg
aagtcccagagatggcaaactcttttaaatttcaattcaaaaagacgcatcttattaact
ggcacacctctgcagaatgatctcatggaactctggtcactaatgcatttcttgatgccc
cacatctttcaatctcaccaggaatttaaggactggttcagcaatccaataactgggatg
gtggagggacaagaaagagtgaacaaagaagttgttgatcgtttgcacaatgttctccgt
ccgtttatcctccgtcgattgaaaagggatgtggagaagcaactccccatgaaacttgag
catgtcatttattgtagactttcaaggaggcagcgtaacttgtacgaggatttcattgct
agctcagagacacaagctactcttgccactgccaacttttttgggatgatcagcattata
atgcaacttcgtaaagtttgtaatcatcccgacttatttgagggtcgtccaattattagt
tcttttgatatggctggtatggacatccaattgagtagttctgtttgttcaatgttttca
cctggcccattttcatctgtagatctttgtgctctggggcttgtatttacacatcttgat
tttaacatggtttcttgggagagcgatgaagtaaaggctattgcaactccttcaagatta
attgaagagcgtgccaatttggctaacatagaagatgttgggcctgggtctaaacatttg
aagaggttgcctggaacaaatatttttgaagagactagaaagtcattattggaggggaga
ttaagagagatgaagcaacgggcagcatctattgcatggtggaattccttgaggtgtcgg
aaaaaacccatatactcaacaaccctacgagaacttctcacagtgaagcatcctatctat
gatatccatcgccaaaaagttgagggactctcctccttatgctcctctaagcttggtgat
gttgttctttcaccaattgaacgattccagaagatgactgatcttgtggaatcatttatg
tttgcaattccagcagcacgttcccctgcacctatcttctggtgcagtcagaccagaact
cctgtgtttctgcattcaacttatgaggagaaatgctctgaaatgttgttgcctcttctt
tcacctattagacctgcaattgtccggagacaactgtatttcccagacaggcgcctaata
cagtttgactgtggtaaattgcaggagcttgctattttgctcaggaagttaaagtcagaa
ggccatcgggtattaatattcacacagatgactaagatgctggatattttggaggctttc
ataaacctgtatggctacacttacatgcgtttagatggatctactcaaccagaggacaga
caaacattaatgcagcgtttcaacaccaatcccaaaatatttatcttcattctatcaacc
cgtagtgggggtgttggcatcaatcttgttggggcagatactgtaatattctatgatagt
gactggaatcctgcgatggatcaacaagcccaagatcgctgccatcggataggacagaca
cgtgaagtgcatatctataggttaatcagtgagagcaccattgaagaaaatatcttaaag
aaagccaatcagaagcgtgctcttgatgatctagttatacagagtggaggatacaacaca
gaatttttcaagaagcttgatcctatggaattgttttctgggcataaaacacttcagatt
aagaacatgcagagggagaaaaacaataacaatggaaatgaggtttctttgtctaatgca
gacgtggaggctgctctgaaatatgctgaagatgaagcagattacatggcattgaagaaa
gtcgaacaggaagaggctgtagacaaccaagagtttactgaagatgccattgggagattg
gaagatgatgaattcgtaaatgatgatgatatgaaggctgatgagcctacagaccatgag
atgacaacttgttgcaaagagggtgaggtgaatttagatgaaaatgattgcattgaagag
agagctgtagcttttactgggaacaaagatgatgttgatatgttggctgatgtcaagcag
atggcggcggcggcagctgctgctggacaagctatctcatcctttgaaaatcagctacgt
ccaatagacagatacgcagtccgttttcttgaactgtgggatccaattatagacaaagca
gccttggaatcccaagttaggtttcaggagacagaatgggagcttgatcgtattgagaag
tacaaggatgaaatggaagctgagattgatgatgatgaagagccattggtgtatgaaaga
tgggatgctgattttgcaaccgaggcataccgacaacaagttgaggcactaactcaacat
cagttgatggaagaaaaggaagctgaagctgaagctgaagctaatgagaaggaaagtgca
gatggacatttagatgctatggtcaggtgtaaagtgccacgtaatcctaaatcaaagtct
aagaagaaaccaaagaaagccaaattcaaatccctcaagaaagaatctctaacttctgaa
ttgaaacacatgaaagtggaggcatcaatagaaactttgtctgcggatgatgatgatgaa
gatgatgatgatgatgatgtgatatatcccgatgatggtacatattcagatgctatgtct
ccttattcaagtgtgcagagaaaacgtaagaaagcagaattagcaattgatatagacaaa
aagaggtcaaggaagaatagcaagaaattcaaaaaagctcctgaaacgtgcccttttgat
gtagattcggacctgtctggaaagcagcatggcaggtctatggaattaaaaccatatgat
gtggtttctgatcttgagcagaaaccagctggcaggagcaaggtgggaggcaaaatctcc
atcagtaccatgccagtgaaacgggtgttgatgataaagccagagaagttaaagaaaggg
aatgtttggtcgagagattgtgttcctccacctgattcatggttgccacaagaggatgca
atattatgtgctgttgtacatgaatatggccctcactggagcttggtcagtgaaactctc
tatgggatggctgctggtgggttttatcggggaagatatcgccatccagttcattgttgt
gagagatttagagaactcatccatagatatgttttatcttctccagaatatcctatcaat
aatgaaaagatgagcaatatggtctccgggaaggcccttctcaaagtaactgaggataac
atacggatgttattaaatgttgctgctgagcagccagaccatgagttacttctccagaag
cacttcacagcactgctttctgctgtgtggagggtgaactctcgtgctgaacgtcaacag
aacttgtcatcatctcgaaatgctctttataatcatggaagggttttcaattcttctgtc
aatcagttaccttcgaattcctcaaaggaatctgcaaaaagaatgaaattcactaatttg
ggacatagtagcaagttgcttgctgctgcactccatgacaccagcagtagaaggccagat
gataaagtttcctattccaacttgagcgaagttgctcctgccattgttgagcagttggaa
ataacattggaattccaaaaagaggaagatgattctttgattcaattcccacctgtaata
agtttgtcaatacctggctcaggaccattgacatcagtaaataaggatagagcagaggct
caacatctcagagcatccacaagtatagctgaaaatcgattcagggatgcagcaagagct
tgtgttgaaggggatttgggttgggtttcatctaccgcaccagcaaatgatttcaagctg
cggctggcttcaaagacacagtccttgggaaagcacaagctcgccgtctccgagtcaacc
aagcctcctaggtcaaagatgaagaaaactttgatagagcacagtgagggacaccttttt
gctgagccagtatcccagccactgcctgtactgtcatctatggatcccaatttaaggttt
gacctgccaccaacagccattcaggatggcaaggatgaatattccatctcgtgcattgag
gaggagctttcagcggaaatggggaccttggatgctgtcccacacgactatgttcttggt
ttgacatcgggtctcgatgatttttcatcgttgcctgaatttactgacatcggataa
DBGET
integrated database retrieval system
