Populus euphratica (Euphrates poplar): 105114292
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Entry
105114292 CDS
T05872
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105114292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105114292
03110 Chaperones and folding catalysts [BR:
peu03110
]
105114292
03029 Mitochondrial biogenesis [BR:
peu03029
]
105114292
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105114292
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105114292
Messenger RNA biogenesis [BR:
peu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105114292
Chaperones and folding catalysts [BR:
peu03110
]
Heat shock proteins
HSP60 / Chaperonin
105114292
Mitochondrial biogenesis [BR:
peu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105114292
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105114292
Exosomal proteins of other body fluids (saliva and urine)
105114292
Exosomal proteins of breast cancer cells
105114292
Exosomal proteins of colorectal cancer cells
105114292
Exosomal proteins of bladder cancer cells
105114292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DD_K
Motif
Other DBs
NCBI-GeneID:
105114292
NCBI-ProteinID:
XP_011009108
UniProt:
A0AAJ6TDG9
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MACSPSLISAISLTDATRLKRVSSPSMLSPKAMAKEIYFNHDGSTTKKLLAGVEMVSELL
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNNLAGD
GSTTSVVLAHGLIAEGQKVIASGMNPVQIARGIVKTSEALVSELKLMSREVENDELADVA
AVSAGNDYTVGNMISDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDR
QRMVAEFHNCKLLLVDKKIQNAKEVFKILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLK
GLLKGAAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLKLEKAGKEVLGTATKVVITKD
STLIVTDGSTREAVEKRVSQICSLVENTEEKFQKKILNERIARLSGGIAILQVGAQTQVE
LKDKLLRIEDALNATKAAIEEGVVVGGGCSLLRLSTKVDGIKEFLDNEEQKMIGAEIFKR
ALSYPARLIAKNSGVNGNVVINQVLSNADIRYGYNAATDTYEDLITAGIIDPTKVVRCCL
EHATSVAKTFLTSDAVVVDIRESDPLPMRKRMPPVAPPPMPKSPGVGPVGVYL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctctccatctctaatctctgcaatatctctcactgacgcaacgaggctcaag
agggtctcctctccttctatgttaagcccgaaagccatggccaaggaaatttacttcaac
catgatggttcaaccacgaagaagcttctggcaggggtggagatggtgtcagaattatta
ggagtgactttaggaccgaaaggaaggaatgtggtgttgcaaaacaagtacggacctccc
aagattgttaatgatggagaaactgtcctcaaagagattgaactggaggatcccttggag
aatgttggagtaaaattggtgaggcaagctggtgcaaaaacaaataaccttgctggtgat
ggttcgacaacatctgtggttcttgctcatggtttaattgctgagggtcaaaaggtgatt
gcatctggcatgaatcctgttcaaattgctcgtgggattgtgaaaacctcagaagctctt
gtatctgaactcaaattgatgtcgagggaggttgagaacgatgagcttgcagatgttgct
gcagttagcgcagggaatgattatacagtgggaaacatgatatccgatgcacttcaacaa
gtgggaagaaggggtgtagtcacaattgagaaaggaaggtgtaccgagaacatcctagaa
attgtagaaggaatgcaattcgatcgtggatatttgtctccttacttcgtaactgatcgg
caaagaatggtcgcggagttccacaactgcaagctactcttggttgacaaaaaaatacag
aatgcaaaggaggtattcaaaatattggataatgcagttaaagagatgtacccaattgta
atagttgcagaagatgtggaccaggaagctctggctccaatcattaggaacaaactcaag
ggtctattgaaaggagctgctattaaagctcctgcctttggtgaacggaagagccactac
ttggatgacatcgctatcttgacaggaggcactgtaattagagatgatatggggctgaag
ctagaaaaggctgggaaggaggtgttgggcactgctactaaggtggtgataacaaaagat
tccacgttgatagtaactgatgggagcactcgagaagctgtggagaaaagggtttctcag
atatgtagtcttgttgagaacactgaagaaaaatttcaaaagaaaatattgaatgaaaga
atagcaaggttatctggagggattgctattctgcaggtaggagcacaaacacaagttgag
ttgaaggacaaactgctgagaattgaggatgctttaaatgcaacaaaggcagcaattgag
gaaggtgtagtagttggaggtggttgtagccttttgaggctatcaactaaggtggatggt
attaaagaatttttggataatgaagagcagaagatgattggagctgagatcttcaaaaga
gctttgagctatcctgcacgattaatagctaagaattctggtgtaaatggaaatgtcgtc
ataaaccaggttttgtcaaatgctgatataagatatggatacaatgctgcaaccgacact
tacgaggatttgataactgctggaattatagatcccacgaaggtggttagatgttgtttg
gagcatgcaacatcggtggccaagacattcctgacatccgatgctgtcgtggttgacatc
agggaatcagatcccctcccaatgaggaaacgaatgccaccagtagcccctcctcctatg
ccaaaatccccaggtgttggaccagttggcgtatacttatag
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