Populus euphratica (Euphrates poplar): 105114580
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Entry
105114580 CDS
T05872
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03013
Nucleocytoplasmic transport
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105114580
09122 Translation
03013 Nucleocytoplasmic transport
105114580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105114580
03041 Spliceosome [BR:
peu03041
]
105114580
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105114580
Spliceosome [BR:
peu03041
]
Complex C
Other components
EJC/TREX
105114580
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105114580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
105114580
NCBI-ProteinID:
XP_011009459
UniProt:
A0AAJ6TEQ9
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MSTTLPPMECLHVTEEFLRELKSGNRSFRLPHPVPILRFLYELSWTLVRGELQFQKCKAA
LDSVEFVDKMSAVGLGSNFADIIAQVAQDLTMSGEYRSRLVKLAKWLVESALVPLRFFQE
RCEEEFLWEAEMIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCRGSE
DTAENTSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDSNVFLELIPIFPKSHASQI
LGFKFQYYQRMELNSPVPFGLFKLTALLVKEEFIDLDSICAHLLPKDDEAFEHYNTFSSK
RLDAAYKIGKINLAATGKDLMDDEKQGDVTVDLFVALDMETEAEAERFSDVEKNQTLGLL
TGFLSVDDWYHAHILFERLSPLNPVAHTQICGGLFRLIEKTISLAYNIIRQPHVQNCGSS
AVAGIDAMDATSSSGHVSLIDLPKEFFQMLVTVGPYLYRDTLLLQKVCRVLRGYYMSALE
LADSGDGALNGESLIPRNRVLRLHIREGRSKVEEALGACLLPSLQLVPANPAAGQEIWEV
MCLLPYEVRYRLYGEWEKDDERNPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLA
HSNPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQVGRDKLKDDG
LNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELVQQMANVQY
TENLTEEQLDAMAGSETLRYQATSFGVTRNNKALFKSTNRLRDSLLPKDEPKLAIPLLLL
IAQHRSVVVINADAPYIKMVSEQFDRCHGTLLQYVEFLCGAVTPPSAYAQLIPSLDDLVH
LYHLDPEVAFLIYRPVMRLFKCEGSLEVFWPLDSNETVTTTSANLEPEAREYSGRVILDL
GSLHKTVMWSDLLETVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNRYESEIAKQQA
ALKALEELSDNSSSAITKRKKEKERIQESLDRLTSELHKHEENVSSVRRRLSREKDNWLT
SCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTL
QPMICCCTEYEAGRLGRFLYETLKIAYYWKSDETIYERECGNMPGFAVYYRFPNSQRVTY
GQFIKVHWKWSQRMSRLLIQCLESSEYMEIRNALILLTKISGVFPVTKRSGINLEKRVTR
IKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLDIKPPSAASKSLSGNVAAAQNS
SALNVSQGEPADGRALVTGSQHGDPGNSNRDLISRAKHADGRSDRTENISHLKSDLGHQK
SKGGSSTNGSNAQSAVSSAVVPIGASRSAENQKGMDDSTNRTLEDSTVRVAAKNLVESEL
KVSTKRPVSKTPKQDVVKDDNKSGKGVGRTLSSSTSDKEIQVHLSEGRQGGASNVSSALT
SNGNALSVSEKVSTMFTRTSDSYGVESKPDSGGNKPMLKDEATEVADVQKPPSRLVHSPR
HDNSVAAAKSSDKLQKRASPTEEPDRLSKRQKGDVELRDLEGEIKFSERERSTDTRSADL
DKVGNDEQNLYRSVDKPLDRSKDKGNDRYDRDHRERSERPDKSRGDDSLVDRSRDKSMER
YGRELSVERGQDRVADRSFERLADKAKDDRSKLRYNDTSAEKSQVDDRFHGQNLPPPPPL
PPHMVPQSVTSGRRDEDADRRFGTTRHVQRLSPRHDEKERRRSEENSLVSQDDGKRRKED
DVRERKREEREGLSNKVEEREREREREREREKTNLPKEEMDSSATAKRRKLKRDHLPTGE
AGEYSPVAPPPPPLGIGMSHSYDGRERGDRKGAMNQRASYLEEPLMRIHGKDVVVKMGRR
DTDPMYDREWDEDKRQRAEQKRRHRK
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaactctccctcccatggagtgtttgcatgtaactgaagaatttctccgcgaa
ttaaagagcggaaaccgtagcttccgtctccctcaccctgtacctattcttcgatttctc
tacgagctatcctggaccttggttcgaggagaattgcagtttcagaagtgcaaagctgct
ttggattctgtagagtttgttgataaaatgtctgctgtagggttgggttcgaatttcgct
gatatcattgctcaagtggctcaagatcttacaatgtctggagagtaccgatctcgtctt
gtaaagctggcaaaatggctagttgaatctgcgttggtcccattgaggtttttccaagag
cgttgtgaggaggaatttttatgggaagctgaaatgataaagataaaggctcaagacttg
aagggcaaagaggtcagggtaaatactcgccttctttatcagcaaacaaaatttaacctt
ctccgtgaagagagtgagggctatgccaaactgattactcttctctgtcgaggttctgaa
gatacagctgaaaatacatcagcagcgacaataggcatcattaagtcattgatcggtcat
tttgatctggacccaaatcgtgttttcgacattgttttagagtgttttgaacttcagcct
gatagcaatgtctttttggaactgattcccatatttcctaagtcgcatgcatcacaaatt
cttggttttaagtttcagtattatcagcgaatggaattaaatagccctgtaccatttggg
ctctttaagcttacagccttactagtgaaggaagagttcattgatcttgatagtatatgt
gcacatttactccctaaggatgatgaggcttttgagcattataacacgttttcttccaaa
cgattggatgcggcctacaaaattggaaaaataaatctggctgctactggaaaggacctc
atggatgatgagaagcaaggagatgtgacagtagatctttttgttgccttagacatggaa
actgaggcagaagctgaacgattctctgatgttgaaaaaaatcaaactttgggcttgctg
actggtttcctttctgtggatgactggtatcatgcccatatacttttcgaacgtctctct
cctctaaatcctgttgcacatactcaaatatgtggtggcttgtttaggctcattgaaaag
acaatctcattagcatataatattattcgtcaaccacatgttcaaaattgtgggtcttca
gcagttgctggtattgatgccatggatgcgacaagttcttctggccatgtctctttaatt
gatcttcctaaagaattctttcagatgcttgtaacagttggaccttatctttaccgtgat
acgttattgctgcagaaggtttgtagagtgttaagaggttactatatgtctgcacttgag
cttgcagatagtggtgatggagctctaaatggtgaatctcttattcctagaaatcgagtt
cttcgtttgcacataagggaaggtaggtcaaaggttgaggaagccctgggagcatgttta
cttccttctttacagttggtacctgcaaatccagcagctgggcaggagatctgggaagta
atgtgtctccttccatatgaggtgcgatatcgtttatacggtgaatgggaaaaagatgat
gagcggaatccaatggttttggctgcaaggcaaacagccaagttggatactagaaggata
ttgaaaaggcttgcaaaggaaaatttgaagcagctgggtaggatggttgcaaaattagct
cattctaacccgatgactgtccttcgaactattgttcatcagattgaggcatacagggat
atgatcactcctgttgtggatgctttcaagtatttgacacagcttgagtatgatatcttg
gaatatgttgtaattgagcggttagcacaagttggtcgtgataagctgaaggatgatggc
cttaatttgtcagactggcttcaatcactggcttcattctggggtcacctgtgtaagaag
tacccgtctatggaattgagaggccttttccagtatttggtgaaccagttgaaaaagggc
caggggattgagcttgttcttctgcaggagcttgttcaacaaatggcaaacgttcaatac
acagaaaacttaacagaggaacagttggatgccatggctgggagtgagacacttcggtat
caagctacttcttttggagtaacaaggaataacaaggcgttgttcaaatctactaacagg
ctacgagactccttgcttcctaaggatgaaccaaagctagcaataccccttttgttactt
attgctcaacatcgatctgtggttgtcataaatgcagatgctccttacattaaaatggtc
agtgagcagtttgataggtgtcatggaactcttcttcaatacgtggaattcctctgtggt
gctgtgacaccaccctctgcatatgctcagttgattccctctcttgatgatcttgtccac
ctgtatcatcttgatcctgaggttgcatttttaatataccgcccagtcatgagactcttc
aagtgtgagggtagtttagaggttttctggccgttagacagcaatgaaacagtaactact
acaagtgcaaacctggagcctgaagctagagaatattctggcagagtgattctggatctt
ggctctctccataagactgtaatgtggtcagatcttcttgagactgtgaaaaccatgttg
ccttcaaaagcctggaatagtctgtcacctgatctctatgccactttctggggactcaca
ctttatgatctatatgtccctagaaaccgttacgagtctgaaattgccaagcagcaagct
gctcttaaagctctggaagagctttctgataattctagttcagcaattactaaaaggaag
aaagagaaggaaaggattcaagaatctctcgatcgtctgactagtgagctccataaacat
gaagaaaatgtttcttctgttcgtagacgactatctcgtgaaaaggacaactggctgact
tcttgtcctgatactttgaaaatcaacatggagttccttcagcgctgtatttttccccgt
tgtactttcagcatgccagatgctgtttattgtgccatgtttgtacatactcttcattca
cttggcacaccatttttcaacactgtaaaccacatcgatgttctgatatgtaaaacacta
caacctatgatatgctgctgtactgaatatgaagcaggtagacttgggaggtttttgtat
gaaacactcaagatcgcttactactggaagagtgatgaaactatatatgaacgtgagtgt
ggaaatatgcctggatttgcagtgtattatagattcccaaatagccaacgggttacatat
ggtcagttcattaaggtacactggaaatggagtcagagaatgtctcggctattgattcag
tgtctggaatcatctgagtacatggaaattcgaaatgctcttattttgttgacaaaaatt
tccggtgtttttccagtaactaaaaggagtggtattaaccttgaaaaacgagtaactaga
atcaaaagtgatgaaagggaggatctcaaggttttggctacaggtgttgctgcagctttg
gctgctagaaagccttcatgggttacagatgaagaatttggcatgggttatcttgacata
aagcctccatctgctgcatcaaagtctttatctggaaatgtagcagcagcacaaaatagt
tctgcccttaatgtttctcaaggcgaacctgctgatggaagagcacttgtaactggaagc
caacatggagatcctgggaattcaaacagagatctgatatccagagcaaaacatgctgat
gggaggtcagatagaacagaaaatatctcacatttgaaatctgatctaggacatcagaaa
tcaaaaggtggttcatcaaccaatgggtcaaatgctcagtcagctgtttcctcagctgtt
gttcctataggtgcatcaagatcagcagaaaatcaaaaggggatggatgactccacaaat
agaacattggaggatagcactgtcagagttgctgcaaagaacttggtggagtctgagttg
aaagtttccacaaagcggccagtgtctaaaacaccaaaacaagatgttgtgaaagatgac
aataaatctggaaaaggtgttggccgaactctatcctcatccacaagtgacaaagaaatc
caggttcatttatcagagggaagacaagggggtgcttctaatgtttcttctgcgctcaca
tcgaatggtaatgctctttcagtgtctgaaaaagtctctactatgtttacaagaacttct
gattcttatggtgtagaatcaaagccagatagtggaggtaacaaacctatgctaaaagat
gaagcaactgaagttgctgatgtgcagaagccaccttctcgacttgttcattctcctagg
catgataactctgttgctgctgcaaagtctagtgataaattgcaaaagagagcaagtcca
actgaagaacctgacagattaagtaaacggcaaaaaggggatgtcgaattgagagattta
gagggtgaaattaaattctctgaaagagagaggtccactgatactcgatctgcggatctt
gataaagtgggaaatgatgaacagaatctatataggagcgtagataaaccgttggatagg
tcaaaagataaaggtaatgatagatatgacagggaccatagggaaagatcagagcgtcct
gataaatcccgtggagatgatagtttagttgacagatcaagagataaatcaatggaaaga
tacggaagagagctttcggttgagagagggcaggatagggtcgctgataggagttttgaa
agactagctgacaaagccaaagatgacagaagcaaattacggtacaatgatacctctgca
gaaaaatctcaggttgatgatcgttttcatgggcaaaacttgcctccgccaccaccttta
cctcctcatatggttccccaatcagttacttctggtagaagagatgaagatgctgacaga
aggtttggaactaccagacatgttcagaggctttctcctaggcatgatgagaaagaacga
agacgatcagaagaaaattccttggtttcacaggatgatggaaaacgaagaaaagaggat
gatgttcgtgagagaaagcgagaagagcgagaggggctgtcaaacaaggtggaagagagg
gaaagagagagggagagggagagagagagagagaaaaccaaccttccgaaggaggaaatg
gactccagtgcaactgctaagagacgaaaacttaaaagagatcatctgccgacgggggaa
gctggtgaatattctcctgttgccccaccacctccaccccttggtattggcatgtcacat
tcatatgatggtagggagaggggagatcggaagggggccatgaatcagcgtgcaagttac
ttggaggaacctctcatgaggattcatggtaaagatgtagttgtcaagatgggccgccgt
gacactgatcctatgtatgatcgggaatgggatgaggacaagaggcagagagctgaacaa
aagcggaggcatcgcaagtaa
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integrated database retrieval system
