Populus euphratica (Euphrates poplar): 105114805
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Entry
105114805 CDS
T05872
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105114805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peu03400
]
105114805
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105114805
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
105114805
NCBI-ProteinID:
XP_011009801
UniProt:
A0AAJ6TFH7
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MGENNNFEEQNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTVHAENANFIA
KTYYHTTTALRQLGSGSSGLSSASISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVK
SGTPGNLGSFEDVLFANNDMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDD
SHFTNVESALVALSCKECLLPMESGKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQD
LGRLVKGPLEPVRDLVSGFEFAPGALGAVLSYAELLADESNYGNYRIRKYNLDSYMRLDS
AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLEVDAINSRLDLVQ
AFVDDTGLRQDLRQHLKRISDIERLIHIVEKGRAGLHHIVKLYQSIIRLPYIKGALERYD
GQFSSLIKKKYLESLEVWTDDNHLNKFIALVETAVDLDQLDNGEYMISPSYEAALGALKA
EQESLEHQIHNLHKQTASDLDLPLDKGLKLDKGTQYGHVFRITKKEEPKIRKKLTTQFIV
LETRKDGVKFTNTKLKKLGDQHQKIVENYKSHQKELVNRVVQITATFSEVFEKLSGLLSE
MDVLLSFADLASSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGK
SWFQIITGPNMGGKSTFIRQIGVNILMAQVGSFIPCDKATISVRDCIFARVGAGDCQMRG
VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVRELKAPTLFA
THFHELTALAHQKADQEPHAKQIVGVANYHVSAHIDTSNHKLTMLYKVEPGACDQSFGIH
VAEFANFPESVVALAREKAAELEDFSPTAIISDDAREKVGSKRKRECNTDDMSKGAARAH
RFLKDFSDLPLYKMDLKEALLQIGKLKDDLEKDAVNCHWLQQFF
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaataacaattttgaagaacagaacaagctccctgagctcaagctagatgct
aagcaggctcaagggtttctctctttcttcaaaaccctaccccatgaccctagggcggtt
cgggtctttgataggcgggactattatacagttcatgccgaaaatgcaaacttcattgca
aagacatactaccacactacgactgctttgcgccagttggggagtggatctagtggtctt
tctagtgcgagcattagtaagaacatgtttgaaacaattgctcgggatcttcttttggag
agaacagaccatactcttgagctttatgaagggagtggatccaattggaaactagtgaaa
agcgggactcctggaaatcttggcagttttgaagatgtattgtttgcaaacaatgacatg
caggattctcctgtggttgttgcactcttgttaaacttccgtgaaaaagggtgcactgtt
gggttgagttatgttgacttaacaaaaagagttcttgggctggctgaatttctagatgat
agccactttacaaatgtggagtcagctttagttgccctcagttgcaaggaatgccttttg
cccatggagagtggcaagtccaatgactgtagaactctgcatgatgttttgaccaaatgc
ggtgtgatgttaactgagagaaagaaaaatgaattcaaaacaagagatttggtgcaggat
ctcggtaggcttgtcaaaggcccccttgaaccagtccgagatttagtttctggttttgaa
tttgcacctggtgctttgggagcagtattgtcctatgcagaattacttgcagacgagagc
aattatggcaattatagaattagaaagtacaatcttgacagctacatgagacttgattct
gctgccatgagggcactgaatgtccttgaaagcaaaactgatgcaaacaaaaattttagt
ttatttggtctcatgaatagaacttgtacagctggaatgggaaaaagattgcttcatatg
tggctaaaacagcctttattggaagtagatgcaatcaactccaggctagatttggtgcag
gcatttgtggacgatactgggcttcgccaagatctaagacagcatctgaaaagaatctca
gatattgaacgactgattcacattgttgagaaaggaagagctggcttgcaccatattgtg
aaactttatcagtccatcataagactgccatacattaaaggtgctctggaacgatatgat
ggccaattttcatcccttatcaagaaaaagtatttggagtcccttgaggtgtggactgat
gataaccacttgaataagttcattgctcttgtggaaactgctgttgacctagatcaactt
gacaatggggaatacatgatttcacctagttatgaagctgccttaggtgcactaaaagct
gagcaggagtcattggagcaccagatacacaatttgcataaacaaactgcttccgatctt
gaccttcctctagataagggattgaagttggataagggaacgcaatacggtcatgttttc
cgaattacaaagaaggaagagccaaaaatacgaaaaaagctgaccacccagtttattgtc
cttgaaactcgtaaggatggggtaaaattcacaaacacgaaacttaaaaaattaggtgac
cagcaccaaaagatagttgagaactataagagtcatcaaaaggagcttgtcaatcgagtg
gttcaaattacagcaactttctctgaggtgtttgagaaattatctggtttgctttctgaa
atggatgtcttacttagttttgctgatttggcttctagttgtcctactccatacacaagg
cctgacatcactccatctgatgtgggagatattatattagaagggagtagacatccatgt
gtggaagctcaggattgggtgaattttattccaaatgattgtaaacttgtcaggggaaag
agttggttccaaataatcacagggcctaatatgggtgggaaatccacatttattcggcaa
ataggtgtgaatattctcatggcccaagttggttctttcattccctgtgacaaggctacc
atttctgtacgtgattgcatttttgcacgtgtgggtgctggtgattgtcaaatgcgtgga
gtttctacttttatgcaagaaatgcttgaaactgcttcaatccttaaaggagctacagat
aggtcattgataatcattgacgagttaggccgcgggacatcaacttatgatggatttggc
ttggcatgggccatatgtgaacacctggttcgagagttaaaagcacctactttatttgca
acccactttcacgaactgactgcattagctcatcaaaaagctgaccaggagccacatgcg
aagcaaattgttggtgttgcaaactatcatgtcagtgcacacatcgacacatcaaatcac
aagttgaccatgctgtacaaggttgagccaggggcttgtgatcaaagttttggtattcat
gttgcagaatttgcaaactttcctgaaagtgttgtcgcccttgcccgagaaaaggcagct
gaattggaagatttctcacctactgcaatcatttcagatgatgctagagaaaaggtcgga
tccaaacgaaagagagagtgcaatacagatgatatgtcaaaaggtgcagctcgggctcac
cggtttctgaaggacttctctgatttgccattatacaaaatggacttgaaggaggctctg
ctacagataggcaaactgaaagatgacttggagaaagatgcagtaaattgccattggctc
cagcaattcttctag
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