KEGG   Populus euphratica (Euphrates poplar): 105114805
Entry
105114805         CDS       T05872                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
peu  Populus euphratica (Euphrates poplar)
Pathway
peu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105114805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:peu03400]
    105114805
DNA repair and recombination proteins [BR:peu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105114805
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 105114805
NCBI-ProteinID: XP_011009801
UniProt: A0AAJ6TFH7
LinkDB
Position
Unknown
AA seq 944 aa
MGENNNFEEQNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTVHAENANFIA
KTYYHTTTALRQLGSGSSGLSSASISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVK
SGTPGNLGSFEDVLFANNDMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDD
SHFTNVESALVALSCKECLLPMESGKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQD
LGRLVKGPLEPVRDLVSGFEFAPGALGAVLSYAELLADESNYGNYRIRKYNLDSYMRLDS
AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLEVDAINSRLDLVQ
AFVDDTGLRQDLRQHLKRISDIERLIHIVEKGRAGLHHIVKLYQSIIRLPYIKGALERYD
GQFSSLIKKKYLESLEVWTDDNHLNKFIALVETAVDLDQLDNGEYMISPSYEAALGALKA
EQESLEHQIHNLHKQTASDLDLPLDKGLKLDKGTQYGHVFRITKKEEPKIRKKLTTQFIV
LETRKDGVKFTNTKLKKLGDQHQKIVENYKSHQKELVNRVVQITATFSEVFEKLSGLLSE
MDVLLSFADLASSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGK
SWFQIITGPNMGGKSTFIRQIGVNILMAQVGSFIPCDKATISVRDCIFARVGAGDCQMRG
VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVRELKAPTLFA
THFHELTALAHQKADQEPHAKQIVGVANYHVSAHIDTSNHKLTMLYKVEPGACDQSFGIH
VAEFANFPESVVALAREKAAELEDFSPTAIISDDAREKVGSKRKRECNTDDMSKGAARAH
RFLKDFSDLPLYKMDLKEALLQIGKLKDDLEKDAVNCHWLQQFF
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgggtgaaaataacaattttgaagaacagaacaagctccctgagctcaagctagatgct
aagcaggctcaagggtttctctctttcttcaaaaccctaccccatgaccctagggcggtt
cgggtctttgataggcgggactattatacagttcatgccgaaaatgcaaacttcattgca
aagacatactaccacactacgactgctttgcgccagttggggagtggatctagtggtctt
tctagtgcgagcattagtaagaacatgtttgaaacaattgctcgggatcttcttttggag
agaacagaccatactcttgagctttatgaagggagtggatccaattggaaactagtgaaa
agcgggactcctggaaatcttggcagttttgaagatgtattgtttgcaaacaatgacatg
caggattctcctgtggttgttgcactcttgttaaacttccgtgaaaaagggtgcactgtt
gggttgagttatgttgacttaacaaaaagagttcttgggctggctgaatttctagatgat
agccactttacaaatgtggagtcagctttagttgccctcagttgcaaggaatgccttttg
cccatggagagtggcaagtccaatgactgtagaactctgcatgatgttttgaccaaatgc
ggtgtgatgttaactgagagaaagaaaaatgaattcaaaacaagagatttggtgcaggat
ctcggtaggcttgtcaaaggcccccttgaaccagtccgagatttagtttctggttttgaa
tttgcacctggtgctttgggagcagtattgtcctatgcagaattacttgcagacgagagc
aattatggcaattatagaattagaaagtacaatcttgacagctacatgagacttgattct
gctgccatgagggcactgaatgtccttgaaagcaaaactgatgcaaacaaaaattttagt
ttatttggtctcatgaatagaacttgtacagctggaatgggaaaaagattgcttcatatg
tggctaaaacagcctttattggaagtagatgcaatcaactccaggctagatttggtgcag
gcatttgtggacgatactgggcttcgccaagatctaagacagcatctgaaaagaatctca
gatattgaacgactgattcacattgttgagaaaggaagagctggcttgcaccatattgtg
aaactttatcagtccatcataagactgccatacattaaaggtgctctggaacgatatgat
ggccaattttcatcccttatcaagaaaaagtatttggagtcccttgaggtgtggactgat
gataaccacttgaataagttcattgctcttgtggaaactgctgttgacctagatcaactt
gacaatggggaatacatgatttcacctagttatgaagctgccttaggtgcactaaaagct
gagcaggagtcattggagcaccagatacacaatttgcataaacaaactgcttccgatctt
gaccttcctctagataagggattgaagttggataagggaacgcaatacggtcatgttttc
cgaattacaaagaaggaagagccaaaaatacgaaaaaagctgaccacccagtttattgtc
cttgaaactcgtaaggatggggtaaaattcacaaacacgaaacttaaaaaattaggtgac
cagcaccaaaagatagttgagaactataagagtcatcaaaaggagcttgtcaatcgagtg
gttcaaattacagcaactttctctgaggtgtttgagaaattatctggtttgctttctgaa
atggatgtcttacttagttttgctgatttggcttctagttgtcctactccatacacaagg
cctgacatcactccatctgatgtgggagatattatattagaagggagtagacatccatgt
gtggaagctcaggattgggtgaattttattccaaatgattgtaaacttgtcaggggaaag
agttggttccaaataatcacagggcctaatatgggtgggaaatccacatttattcggcaa
ataggtgtgaatattctcatggcccaagttggttctttcattccctgtgacaaggctacc
atttctgtacgtgattgcatttttgcacgtgtgggtgctggtgattgtcaaatgcgtgga
gtttctacttttatgcaagaaatgcttgaaactgcttcaatccttaaaggagctacagat
aggtcattgataatcattgacgagttaggccgcgggacatcaacttatgatggatttggc
ttggcatgggccatatgtgaacacctggttcgagagttaaaagcacctactttatttgca
acccactttcacgaactgactgcattagctcatcaaaaagctgaccaggagccacatgcg
aagcaaattgttggtgttgcaaactatcatgtcagtgcacacatcgacacatcaaatcac
aagttgaccatgctgtacaaggttgagccaggggcttgtgatcaaagttttggtattcat
gttgcagaatttgcaaactttcctgaaagtgttgtcgcccttgcccgagaaaaggcagct
gaattggaagatttctcacctactgcaatcatttcagatgatgctagagaaaaggtcgga
tccaaacgaaagagagagtgcaatacagatgatatgtcaaaaggtgcagctcgggctcac
cggtttctgaaggacttctctgatttgccattatacaaaatggacttgaaggaggctctg
ctacagataggcaaactgaaagatgacttggagaaagatgcagtaaattgccattggctc
cagcaattcttctag

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