Populus euphratica (Euphrates poplar): 105115132
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Entry
105115132 CDS
T05872
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
peu01009
]
105115132
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105115132
03041 Spliceosome [BR:
peu03041
]
105115132
Protein phosphatases and associated proteins [BR:
peu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105115132
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105115132
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105115132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
PHM7_cyt
RRM_Nup35
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
105115132
NCBI-ProteinID:
XP_011010234
UniProt:
A0AAJ6TFH5
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MELKVSTLKTGGLSPADCISDPEEKEVSDEDDDDRNHKHRRREIRSQSLERDSLEPVFTR
PYRKRNKPFENGQFYQENDYNSVPLEKGFATKFERIRPGLVSLPQMPVDWNQRIRSNQTF
YGDPGLSRGRGRESASWSQHDSRFSPVDIASQMVHQGQSLFTTGRGLANVSNAQTASWNA
YGLFPGIPNGGLDKLRPIGLQGTLRPAVTSSLNMGIPQQRCRDFEERGFCLRGDMCPMEH
GVNRIVVEDVQSLSQFNLPVSLPRAQLVGTTARLGALPTVGAPSAILINSKGMHSKCNKP
GIVNVGLGFNGAHTGSASVSGGDLYDPDQPLWNDSVPETSSALIAPHSPKIDEIESMTSI
DSFDHNHVSLRGGADNECPIRSTGIAVHSQSLNSSVWGKVRASNNRLYVKEKTDLTVSTL
NNMESESKENQGAITNVRGTSRQGKQINFEDSSAKTIDSPAKTQSDILRHTPKPSQKALR
TLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNTERAFVQFSKREEAEAALRAPDAVM
GNRFIRLWWANRDSIPDGGAGSSNSVSVTPRGVTSISSAPHLPVGNSGKDNLQLSVSKAT
AVPPSVASVPAIDHSKVITTNVPKVPPPMQKLESLEQLKEELRKKQELLDQKRNDFRRQL
DKLEKQATGVKGEVTAEPASKRHKTGITVSDIVKAATPRSADPDSASPHAEMVDKNKTVE
NVVSSSSKTCVMMALQDSACSKQSIHPLAPVGPPFLMNKYKLDNRPTTFKIISPLPVGLA
NVATLKEYFSSYGDLSAVELEDEPSDYDGVGSETLKNCSACVTFTTRRSAERAFLNGKCW
RGKNLKFVWLTSSTSSNEPGSGQNPSAHNCLVDTDQSVEKLACSDSQEASASGKGGPENS
EINNGTGPIELHEVLQCHSASILGEAESLKCEPSPTSVSHEKESTKKDPSQTTRSEKETP
EGIVW
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtttcaacactaaagacaggtggtctttctcctgctgattgcattagc
gatcctgaggagaaggaagtcagtgatgaggatgatgatgatcgcaaccataagcatcgt
agacgggagatacgttctcaatctttggagagagattctctggaaccagttttcacaagg
ccatacaggaagcgcaacaaaccatttgaaaatgggcaattttaccaggaaaatgactat
aactctgttcctcttgagaaaggctttgccacgaagtttgaaagaatacgacctggcttg
gtgtcgttacctcaaatgcctgtggattggaatcaaagaatcaggtcaaaccaaacattt
tatggagatcctggtcttagcaggggaagaggaagggagtctgcttcttggagccaacat
gattctaggttcagcccagttgacattgcttctcaaatggttcaccaggggcagagcctc
tttactactgggaggggtttggcaaatgtttcaaatgcacagactgcatcctggaatgca
tatggtttatttccaggaataccaaatggtggcctggataaactccgtcccattggtttg
caaggaactctcagaccagcagtaacttcttcattgaatatgggcattcctcaacaaagg
tgtagagactttgaggagcgtggattttgtctaagaggggacatgtgtccaatggagcat
ggtgtcaatcgtattgttgttgaagatgttcagagcctttcacagtttaatctccctgtt
tcgcttccacgtgcccaactagttggaacaactgctagactgggcgctctaccaactgtt
ggtgccccttcagccatattgataaatagcaaaggaatgcatagcaaatgtaacaagcct
ggaatagtcaatgtcggattgggcttcaatggtgcacatactggttctgctagtgtgagt
ggaggagacttgtatgatccagatcaacccctgtggaatgacagtgttcctgaaacttca
agtgcactcatagcaccacattcacctaaaattgatgaaattgaatccatgacaagtatt
gattcttttgatcacaatcatgtcagtttacgtggtggtgctgataatgaatgcccaatt
agaagcactgggattgctgtgcattcacagagtttgaattcttctgtttggggtaaagtc
agggcttcaaacaatagattatatgtgaaagagaaaaccgatttgactgtaagtacgtta
aataatatggagagtgagtccaaggaaaatcagggtgcaataaccaatgttcgtggtact
tcccgtcaaggaaaacaaattaattttgaggattctagtgcgaaaaccatagattcacct
gcgaagacacaaagcgacatcctgcgccacacaccaaaaccatctcaaaaggcactgcgt
acactatttgtcaatggcattccacagaaaagcaacaaaagagaggctctactttctcat
tttcaaaaatttggagaggttattgacatttatattccattgaacactgagcgagcattt
gttcaattctcaaaaagggaagaggcagaagctgctctaagggcacctgatgctgtaatg
ggcaaccgttttatcaggctgtggtgggctaatcgtgatagcattcctgatggtggtgct
ggcagtagcaatagtgtatctgtcacaccccggggtgtgacttccatttcatctgcaccc
catctgcctgttggtaacagtggaaaagataatcttcagttgtctgtttcaaaggctact
gctgttcctccctctgttgcttctgtccctgccatagatcactctaaggtcatcacgaca
aatgttccaaaggttccacctcctatgcagaagctagagagtttagaacaattgaaggaa
gagctgcgcaagaagcaggagctgctggatcagaagcggaatgactttcggcgtcagttg
gacaagcttgagaaacaagctacaggagtcaagggtgaggtaacagcagagcctgcttcg
aagagacacaaaaccggaataacagtatctgatattgtcaaagctgctactccgaggtct
gctgatccagattccgcgtccccacatgcagaaatggtggataagaacaaaacagtggag
aatgttgtgtcatctagtagcaaaacatgtgtaatgatggctctgcaggattctgcatgc
tcaaaacaatcaattcatcctttagcacctgttgggcctccttttctgatgaataaatac
aagttggacaaccgacctacaacattcaaaattatttcacctttaccagttggtttggca
aatgttgctactttaaaggaatacttctcatcatatggtgatctttctgctgtggaacta
gaagatgagcctagtgattatgatggtgttggatctgagacactgaaaaattgttcagct
tgtgtgactttcacaacgcgccgatcagctgagagggctttcctaaatggtaaatgttgg
cgaggcaagaatttgaagtttgtgtggctgacatctagcacttctagcaatgagccggga
agtgggcaaaatccctctgctcacaattgtcttgtagatactgatcagtctgttgaaaaa
ctagcttgttcagattcccaggaagcttctgcatcaggaaagggaggacctgaaaattca
gagataaataatggtactggccccatagagttgcatgaagttctccagtgccattcagcc
tcaatattaggtgaggcagagtcactgaaatgtgagcctagtccaacatcagtatctcat
gagaaagagtcgacaaaaaaggaccccagtcaaactacaaggtcagagaaagagaccccc
gaaggcattgtctggtga
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