Populus euphratica (Euphrates poplar): 105115307
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Entry
105115307 CDS
T05872
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105115307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105115307
03009 Ribosome biogenesis [BR:
peu03009
]
105115307
04131 Membrane trafficking [BR:
peu04131
]
105115307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peu04147
]
105115307
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105115307
Ribosome biogenesis [BR:
peu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105115307
Membrane trafficking [BR:
peu04131
]
SNARE
SNARE associated proteins
Others
105115307
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105115307
Exosome [BR:
peu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105115307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_17
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
Vps4_C
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
105115307
NCBI-ProteinID:
XP_011010444
UniProt:
A0AAJ6X9L2
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVSLHPETMEKLQLFRGD
TILIKGKKRKDTICIALADDSCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRQKEN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
ASAGSDPFAASAGGADEDDLYS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaagctgaatcctctgactctaaaggaacaaagagggattttagtaccgcg
attttggagagaaagaaggctccgaatcggcttgttgttgatgaggctgtaaacgatgat
aactctgtcgtttcgcttcatcccgagactatggagaaactccagctctttcggggtgac
accatcttaatcaagggaaagaaaaggaaagataccatttgcattgcccttgctgatgac
tcatgcgatgaaccaaagatcaggatgaacaaggttgtgaggtcaaacctgagggttagg
cttggagacgtggtatctgtgcaccagtgtcctgatgtcaagtatggaaaacgcgtgcac
atcttgcccatcgatgacacaattgaaggggtcactggaaatctctttgatgcatacttg
aagccttatttcttggaagcatatcgcccagtgaggaagggtgacctcttccttgtacga
gggggaatgagaagtgtggaattcaaagttattgaaactgaccctccggagtactgtgtg
gttgctccagacactgagatcttctgtgagggagagcccgtgagaagagaggatgaggat
agattggatgaagttggttatgatgatgttggtggtgttagaaaacaaatggctcagatt
cgggagttagtggagcttcctttgagacacccacagctattcaaatcaattggtgttaaa
ccaccaaaaggaattctgctgtatggacctcctggttctgggaagactctaattgcccga
gctgttgcaaatgaaactggtgcttttttcttctgtattaatggacctgaaattatgtca
aagttggctggagagagtgaaagcaatctcagaaaagcatttgaggaagcagagaaaaat
gcaccttcgattatatttattgacgaaatagattcaattgcccccaagcgagagaaaaca
aatggagaggttgagaggagaattgtatcccaacttttgacactcatggatggactaaaa
tcccgtgcacatgttattgtcattggggctacgaatcggcccaatagcattgacccagct
ctgaggaggtttgggagatttgatagggaaattgatattggtgttccagatgaagttggg
cgccttgaggttcttcgtattcatactaagaacatgaagcttgctgaggatgttgatttg
gaaagaatagctaaggatacccatggttatgttggtgctgacttagcagccctttgcacc
gaggctgcgcttcaatgcatcagagaaaagatggatgtgattgacttggaagatgagaca
atagatgctgaaatactcaactcaatggcagtgactgacgaacacttcaagactgctctt
ggaacaagcaacccatctgcattgcgtgaaacagttgttgaagttcctaatgttagttgg
gaagatattggtggtcttgaaaatgttaagagggagctccaggagactgttcaatatcca
gtggagcaccctgagaaatttgagaagtttggaatgtcaccatcaaagggagttctgttc
tacggtccccctggatgtggaaaaactcttctggctaaagctattgccaatgaatgccag
gcaaacttcatcagcgtcaagggtcctgaattgcttacaatgtggtttggtgagagtgag
gccaatgtacgagaaatttttgacaaagctcgccaatctgctccttgtgtcttgttcttt
gatgaacttgactcaattgcaactcagagaggaagcagtgtaggagatgctgggggtgct
gctgatagagttttgaatcagcttctgacggagatggatggcatgactgcaaagaaaact
gtttttataattggggccacaaacagacccgacatcatagaccctgccctattgcgtcct
gggcgtcttgatcagttgatctatatccctcttcctgatgaggagtcacgctttcaaata
ttcaaatcttgcttaaggaaatcaccagtctccaaagatgtcgacctaagagcacttgcc
aagtacacacagggtttcagtggtgctgatattacagaaatatgccagcgtgcttgcaaa
tatgccataagagagaacattgagaaagatattgagaaggagaggaggcaaaaagagaac
cctgaggctatggaggaagatgttgaggatgaggtggcagagatcaaggcagcacatttt
gaggaatccatgaaatatgcccgtcggagtgttagtgatgctgacatccggaagtatcag
gcatttgctcaaacactgcaacagtcaagagggtttggaactgaattcaggtttgctgaa
gctagtgcggggtctgatccgtttgcagcttctgctggcggagctgatgaagatgacctt
tacagttaa
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integrated database retrieval system
