Populus euphratica (Euphrates poplar): 105115487
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Entry
105115487 CDS
T05872
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105115487
03041 Spliceosome [BR:
peu03041
]
105115487
03036 Chromosome and associated proteins [BR:
peu03036
]
105115487
Enzymes [BR:
peu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105115487
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105115487
mRNA cycle factors
Common to processing body (P body) and stress granule
105115487
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105115487
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105115487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105115487
NCBI-ProteinID:
XP_011010680
UniProt:
A0AAJ6X9T9
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MNKKNSWADLAANSAAENINAGYSANTGSVGTTSAAAPSRSTYVPPHLRNRAPPSDSPAA
AHSGPASSNDHSGYGGGSRSGVPRNDFRGGYGGSGGRSGGWGNRGGWDRGREREVNPFGD
DDKTEQPFSEQENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVK
PTPVQRHAIPISLTGRDLMACAQTGSGKTAAFCFPIISGIMKMQDQSAQRPLRGARTVYP
LALILSPTRELSMQIHEEAKKFSYQTGVKVVVAYGGAPIHQQLRELERGVDILVATPGRL
VDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGSRQTMLFSATFPK
EIQRLASDFLASYVFLAVGRVGSSTDLIAQRVEFVQESDKRSHLMDLLYAQRANGVQGKQ
ALTLVFVETKRGADSLEHWLCINNFPATSIHGDRSQQEREQALRSFKSGNTPILVATDVA
ARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNASMARPLSELMQ
EANQEVPAWLSRYAARASFGGKNRRSGGGRFGGRDFRRDSSSNRGNSDYYGGGSSGGYGG
ASGGYGGGGYGSGVTSAWD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaagaattcatgggcagatttggctgcaaattctgcagctgagaacataaat
gctggttattctgctaacactggaagtgtaggtactacttctgctgctgccccttcccga
tccacatacgtccctcctcatctccgtaaccgtgcaccaccttcagactcaccagctgct
gctcatagtgggcctgcttcgagtaatgatcattctgggtatggtggtggatcgcgctcg
ggtgttccaagaaatgatttccgtggtgggtatggtggtagtggtgggagatctggtggg
tggggaaacagaggtggctgggatcgtgggagagagcgggaagtaaatccttttggagac
gatgacaaaacagagcagccatttagtgagcaagagaatactggcattaattttgatgca
tatgaagatattccagttgagacaagtggggagaatgtgccaccagctgtaaataccttt
gcggagatcgatttgggtgaggcgttgaatctgaacatccgcaggtgcaagtatgtgaag
cccacgcccgtgcagcggcatgccattccaatctctcttacaggccgggacttgatggcc
tgtgcccagactggttctgggaaaactgctgctttctgtttccctattattagtggaatt
atgaaaatgcaagatcagagtgcacaaaggccacttcgtggagcacgaactgtgtacccg
ctagctcttattctctctccaaccagagagctttcaatgcagatacatgaggaagctaag
aaattctcatatcaaactggtgttaaagtggttgttgcttatggaggagcaccaattcac
caacagctgcgagaactggagagaggtgttgatattctggtggcaactccaggaagattg
gtagatttgttggagagggctagggtttcattgcagatgatcaagtatttggccttagat
gaggcagatcggatgctggatatgggttttgagcctcaaataagaaaaattgttgaacaa
atggatatgcctccacctggttcaagacagacaatgctgttcagtgctacctttccaaaa
gagatacagagactagcttctgactttttggcaagttatgtctttttggctgttggacga
gtgggctcaagtacagatttgattgcccaaagagttgaatttgttcaggagtctgacaaa
agaagtcacctcatggacctcctttatgcacagcgggcgaatggtgttcagggcaagcaa
gctttgacattagtatttgtggagactaagaggggtgctgattcacttgagcattggcta
tgcattaataatttccctgctactagcatacatggtgatagatcacaacaggaaagagaa
caggcattgcgctcatttaaatctggcaacactccaattttggtagcaactgatgttgca
gcacgtggtcttgatattcctcgtgttgcacatgtggttaactttgatctcccaaacgat
attgatgattatgtccatcgtatcggacgaacgggacgagctggaaaatctggtctggca
actgccttcttcaatgagggcaatgcatcaatggcaaggccactatctgaactaatgcaa
gaagcaaatcaagaagtacctgcttggctctctcgttatgcagcccgtgcttcctttgga
gggaagaaccgtcgttctgggggaggtcggtttggtggccgtgactttcggagggattcc
tcttctaataggggcaattcagattattatggtggaggaagcagtggtggatatggaggg
gcttcaggggggtatggtggtggaggctatggttctggggtgaccagtgcatgggattaa
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