Populus euphratica (Euphrates poplar): 105115494
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Entry
105115494 CDS
T05872
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105115494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105115494
Spliceosome [BR:
peu03041
]
Complex A
Other components
Complex A specific factors
105115494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
105115494
NCBI-ProteinID:
XP_011010696
UniProt:
A0AAJ6X9U3
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MTATSSSSSASTTSGPKVSLFAAKSGFVIPKNKLLGSLVSIVKGGKKPGSKNAVNGESTN
QEQVQRKTKWGPDLTKDASVKRGRALAYQIRVDQIVQQLELGIPEPGDGDSHDSNELEDR
KSSIPQIHTKNSEILELEKQEAIGEILILNPSYKAPPNYKPLLKETTVPIPVKEYPGYNF
IGLIFGLGSETQKRLEKETGAKIQVHGSNTHTGEKVEISPSDGNETQVAYEELSVLVTAD
TFEKVDAAVVLIELLITSVSGNLAAGDNANVSQNQAASTAVNQGVVLSSTPQQGQFQYQN
SWLPAATPLHPPPGLISPQTSSAPVLNNPIPLQSASFNSSTMLSLFGPRLAQGFSNPYQP
RNFSMPTPQPRSFTGSQPHPTGLYSVARPPVLQPSSSGSHDGLLVPSGWSGSPASVPASL
GFVNMGQTTIPIVPSPGPWPTVPQLGFPSNAPPPNAANMVSPVTFPPGPSSLQSHSVSMN
RPTLIQSSLVAPLPISSISPVLGSTPISVVVGAFSGTSSNFAPMRSPTITGAKIQHSGPG
DFTFQSHHLQNPAPQISPRLSSHHATQNGPLPRPTMQSPAPQGPPSHFEVPNSTPLPGRQ
MFPRPHVSNQMGQVPFVGNPTGPSLPLGLPAFSNANSFGQPVMEMVSGNLSSTPHMPYLK
GPLPPRPGNPLQLQQNYPVPIAPRGQAFAPKQQPIISLAFARPASFHGGQHVYDPFSPTP
VSTASQRQGGNLGDVSKPENDPL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacaagttcttcatccagtgcatcgacaactagtggtcccaaggtgtcttta
tttgcagccaagtcagggtttgttatccctaaaaataaacttttgggttcattagtttcc
atcgtcaaaggaggtaaaaagccgggtagtaaaaatgcagtgaacggagaaagtaccaat
caggaacaggttcagaggaaaaccaaatggggtcctgatttaacaaaagatgcttccgtt
aaaaggggaagagccttggcataccagattcgagtggatcaaattgtgcaacaactggaa
ttgggaattccagaacccggggatggagactcacatgactccaatgagcttgaagatcgc
aaatcttcgattccacaaatccataccaagaactctgagatcttggaacttgaaaaacag
gaagctataggtgagatacttatattgaatccaagctacaaggctccacccaattataag
cctttgctaaaagagaccacagttcccatccctgtcaaggagtatcctggatataatttt
attggtctaatatttgggcttggaagcgagactcagaagcgattagaaaaggaaactgga
gccaaaatacaagtacatggttccaacacgcatacaggagagaaggttgagatttctcca
tctgatggcaatgagactcaggttgcttatgaggagttgagtgttcttgtaacagccgac
acatttgagaaagttgacgcagctgttgtcctgattgaattgctaatcacctcagtatca
ggaaatttagcggctggggataatgcaaatgttagtcagaatcaggcggcctctactgct
gtaaaccaaggagtggtgctatcttctactcctcaacaaggccagttccaatatcaaaat
tcatggctccctgctgccacacctctacatccacctccaggcttaatttcccctcagact
tcttcagcaccagttttaaacaatcctatacctttacagtcagcatctttcaattcttca
accatgctttcattattcgggcctagactggcacagggcttttcaaatccatatcagcct
agaaatttttccatgcctactccacagcctcgatcttttactggtagccagccccaccca
acagggctgtactctgttgcaaggccaccagtacttcaaccctcgtcaagtggttcacat
gatgggctattagtcccttctgggtggtctggatctcctgcaagtgttccggcatcatta
ggttttgtcaacatgggacaaacaacaattcctatagttccctcacctggtccatggcct
actgttccacagctaggttttccatccaatgcgccacctccaaatgcagctaatatggtt
tctcctgtaaccttcccaccgggaccatcctctctgcaatcacacagtgtttctatgaat
cgtcctaccctaatccaatcttcactggttgcacctttgccaatttcatccataagcccg
gtacttggttccacgccaatttcagtagttgtaggagctttctctggaactagctcaaat
tttgctcccatgagatcacccacaataacaggtgcaaaaatacagcactctggtcctggt
gattttacttttcaatcacatcatctgcagaatccagctccccaaatatctcccaggctt
agcagtcatcatgctactcaaaacggtccgcttcctagacccacgatgcaatcgccagca
cctcaaggaccaccttctcactttgaggtccctaattcaactcctctacctggcaggcag
atgtttcctagaccacatgtcagcaatcaaatgggtcaagttccctttgttggaaatcct
accggtccctcgcttcccctcggccttccagcattttcaaatgcaaattcatttggacaa
ccagtcatggagatggtgtcggggaacttaagttcaactccccacatgccctatttaaaa
ggtcctttacctcccagaccgggaaaccccttgcaacttcagcagaattatccagttcca
atagctcctcgaggacaagcatttgctccgaagcagcagcctatcatctccttggcattt
gctagaccagcttcattccacggaggtcagcatgtttatgatccattttctccaactcct
gtgtcaactgcgtctcaacggcaaggaggtaatctaggagacgtgagcaagccagagaat
gatccactgtaa
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