Populus euphratica (Euphrates poplar): 105115527
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Entry
105115527 CDS
T05872
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03030
DNA replication
peu03410
Base excision repair
peu03420
Nucleotide excision repair
peu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105115527
03410 Base excision repair
105115527
03420 Nucleotide excision repair
105115527
03430 Mismatch repair
105115527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peu03032
]
105115527
03036 Chromosome and associated proteins [BR:
peu03036
]
105115527
03400 DNA repair and recombination proteins [BR:
peu03400
]
105115527
DNA replication proteins [BR:
peu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105115527
DNA Replication Termination Factors
ELG1-RFC complex
105115527
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105115527
DNA repair and recombination proteins [BR:
peu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105115527
Check point factors
HRAD17(Rad24)-RFC complex
105115527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
Ribosomal_L14
RsgA_GTPase
AAA_30
DUF3641
DUF6984
AAA_22
Motif
Other DBs
NCBI-GeneID:
105115527
NCBI-ProteinID:
XP_011010742
UniProt:
A0AAJ6X9K4
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MPPSPAIPRSTCDPYLSCTSSPSKAAPRLPPSNQSVYSNHSSKSSYWQAWSNIGKLGTFI
LPGRRSTDWSSRHSNLTEESLDAHNRRQEAINILHDKNAKCSPYYKGLVDYSLIISRERY
PLPIPPTSPCRESHATAVTSSSLSTFIFKMQEWSSCFSVSSKSNNVKGKEDNAPSAVIAT
STDKIKPTKPTPAAPSYSASSSSSQPSGRTTLEKETRDVNASRVVTEEKPLRERVSESKP
PAAAPSLTNDDNREILDCPSTHEVMNIDRKFTLANKYQPKALKDFICNRDQAIRMQGVMS
DVDCNHFIFEGPAGVGKRTMIRAMLQEAFGQERLQEREECKSFNLKGEQIGSIQVRVKVS
SQHVELNLSDLKGYEKQVIVELIKETRNNHNKRIISNNPINPKSRLDDCRAIILYEADML
STDALLYIKWVLERYKGFSIFFFCCNDVSRLQPIRSLCTVVQLLPPSKREVVQVLEFIAE
QEGIELPHPLAEKIADKSKNNLRQAIRSFEASRHGSYPFTEDQEILTGWEDDIANIAKDM
VEEQSPKQLYIIRGKLQNLIEHDVSPDFFFESLLGELKKHMDESFQLQLDGLHKDYNRND
GNMLEISENELIFLRSRHEEAGKRIHDPARKNADHLFVRIEEFIAKFMSFYKISVTNNKS
IQHDGGP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaagtccagcaatccctcggtccacttgcgatccctacctgtcatgtacatca
tcaccatccaaagccgccccccgtctacctccgtccaaccaatctgtgtactctaatcac
tcctccaagtcgtcctattggcaagcttggagtaacatcggcaaactaggcaccttcatc
ctcccgggaaggaggagcacagattggtcatccaggcactccaacttaaccgaggagagt
ctcgatgcgcataatagaagacaagaagccattaatatcctccatgacaagaacgcaaaa
tgcagtccctattacaagggcctcgtcgattattccctcatcatcagccgcgagagatat
cctttgccaatacccccaaccagtccctgccgtgaaagccacgccacagccgttacttcc
tcttctctttcaactttcatctttaagatgcaagagtggagttcttgcttttcggtttcc
tctaaatctaacaacgtcaagggcaaggaggacaatgccccgtctgcagtaattgctacc
agcaccgacaaaattaaacctacgaagccaacacctgcagctcccagttattctgcctcc
tcctcctcttctcaaccatcaggcaggactaccttagagaaggagacgcgtgacgttaat
gcctcacgagttgttactgaagagaagccattgagggagagagtatcagaatcaaaacca
cctgctgcagcaccatctctaacaaatgatgataatcgtgaaatactggactgtccaagt
actcatgaagtgatgaatattgacaggaagtttacgttggcaaacaagtaccagcccaaa
gccttgaaagatttcatctgcaatcgagatcaagccattaggatgcagggtgtcatgagc
gacgttgattgcaaccatttcatatttgaaggacctgcaggcgttggaaagagaaccatg
ataagggccatgcttcaggaagcctttggacaggagagattgcaggagagggaagaatgc
aagtcattcaacttgaagggggaacagattggtagtatacaggtaagagtgaaggtctcc
tcccaacacgtagaactcaatctctctgatctcaaaggctatgaaaagcaagtcattgtt
gagctcatcaaggaaacacgtaataatcataataagaggattatttccaacaaccctatt
aatcccaagtcaagacttgatgactgccgagcaattattttgtacgaggcagacatgcta
tctacagatgccctcctctatattaagtgggtgctggagaggtataaaggattcagtata
tttttcttctgctgcaacgatgtctcaaggcttcaaccaattagatcactttgcactgtt
gtccagcttttgccaccttcaaaaagagaggttgttcaagttttggaattcatagctgaa
caagaaggcatagaattgccacatccattggctgaaaagattgctgacaaatctaagaac
aaccttcgtcaagccatccgatcatttgaagcctcccggcacggaagttatcccttcacg
gaagatcaagaaatcctgactggatgggaagatgatattgcaaatatcgccaaggatatg
gttgaagagcaaagcccaaaacagctgtatatcatacgtgggaagcttcaaaatctgata
gagcatgatgtatctcctgatttctttttcgagtcccttcttggagaactgaagaagcat
atggatgagtcatttcagctccaactcgacggtctacataaggactacaatagaaatgat
ggaaacatgttggagatcagtgagaacgaactgatatttctgcgcagtcgacatgaagag
gctggtaaaaggattcatgacccggcaaggaaaaatgctgatcacctttttgtgaggatt
gaagagttcattgcaaaatttatgagcttctacaagatatcggtcaccaataacaaaagc
attcagcatgatggtggaccatga
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