Populus euphratica (Euphrates poplar): 105116195
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Entry
105116195 CDS
T05872
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105116195
Enzymes [BR:
peu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105116195
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
105116195
NCBI-ProteinID:
XP_011011722
UniProt:
A0AAJ6TJ14
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All DBs
Position
Unknown
AA seq
675 aa
AA seq
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MDKVGASRLRWLTLLIWFFFIVKLAAASRKIFQSENGKSLGVRLHKHHHRMVMDNGLVQV
TLSSPGGDITGIQYNGIHNVLETRNREGNRGYWDVVWNSPGNHIAYDRLKGTDFNVIMED
EDQVELSFKKSWNFTNGNSSAPLNVDKRYIMRRGSSGVYLYAIFERLEGWPDMDMDQIRI
VLKLQNDKFHFMAISDDRQRIMPMPRDRISGEPLAYPEAVLLTNPTTRQLGGEVDDKYQY
SCENKDNRVHGWISENPQVGFWMITPSDEFRAGGPLKQDLTSHVGPTVLCMFTSTHYSGK
DLNTKYRNGRPWKKVLGPVFVYLNSISSLEDPKTLWEDAKDQMSIEVNSWPYNFPQSEDF
PSSDRRGTVSGQLLVGDRYISDKPMWASYAYVGLAAPGGVGSWQRDAMGYQFWVQANEEG
HFLIENIRAGHYNLYAWVPGIVGDCRYDVIIHIQPGCDVQLGVLVYEPPRNGPTLWQIGI
PDRTAAEFFVPDTYPTLMNKLFINQSTHKFRQYGLWERYSDLYPKHDLIYTTGISNYHQD
WFFAQVPRNMGNHTYQATTWQIKFEIENATPRTGNYTLQVALASASASELQVRLNDRRAK
RPHFRTRLIGRDNAIARHGIHGLYWFYSINVPSRLLRQGNNTVYLTQSRSKSPVGGIMYD
YIRLEGPPETGPSVE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtcggtgcttctcgtttgaggtggttaacattgttgatttggttcttcttc
attgtcaagctcgccgctgcctcaaggaaaattttccagagtgaaaacggtaaatctctt
ggggtgcggctgcataagcatcatcatcggatggtgatggataatggcctcgtacaagtc
actttgtctagtccgggcggtgatatcaccggaatacagtacaacggaatccataatgta
cttgaaaccaggaacagggaaggcaaccgagggtattgggacgttgtctggaactcgcct
ggaaatcatatagcttacgacagattgaaaggaacagattttaacgttataatggaagat
gaagaccaggtagaactctcattcaagaagtcttggaatttcacaaatgggaactcctca
gcccccctgaacgtagacaaaaggtatataatgcgacggggcagctcaggggtctacttg
tatgccatatttgaacgcctggagggatggcctgacatggacatggatcaaattagaatc
gttttgaagctccaaaatgacaagtttcacttcatggcaatatctgacgacaggcaaagg
atcatgccaatgcctcgagacagaatcagtggtgaacctcttgcatatccagaagctgtt
ctcctgaccaatccaactactcgacagcttggaggagaggtggacgacaagtaccaatat
tcatgtgagaacaaagacaacagggtacatggttggatatcggaaaatccacaggtggga
ttttggatgatcacaccaagtgatgagttccgggctggcggccccctgaaacaagacctc
acatctcatgttggccccaccgtcctctgtatgtttaccagcactcattacagtgggaag
gacttgaacacaaaatatcgaaacggaaggccatggaaaaaggttctgggacctgtattt
gtctatctcaattccatctcctcccttgaagatcccaaaacactatgggaagatgctaaa
gatcagatgtctatagaagtcaacagctggccttacaatttcccacagtcagaagatttc
cctagctcagatcgacgaggaactgtttctggtcaattacttgttggtgacaggtacatc
agcgacaaaccaatgtgggcgagctatgcctatgtgggcttggctgcaccaggaggggtg
ggttcgtggcaaagagacgccatggggtatcaattctgggttcaagccaatgaggagggt
catttcttaatagaaaacattagagctgggcactataatctgtatgcctgggttcccggc
attgttggggattgccgatatgatgttattatccacatccaaccaggatgtgatgtccaa
ttgggtgttcttgtgtacgagcctccaagaaatggtccaaccctttggcaaataggaatc
cctgaccgcactgctgccgaattctttgtgcccgacacatacccgacgctcatgaacaaa
ttgttcatcaaccaatcaactcacaagtttaggcagtatggactgtgggaaaggtactca
gatttgtatcctaagcatgaccttatttacactactggcatcagtaattatcatcaagat
tggttctttgctcaggttcccaggaacatgggaaatcacacatatcaagccacaacatgg
cagatcaaattcgagatagaaaatgccaccccgaggactggaaactatacgctccaagtg
gccttggcatcagcctccgcttctgaactacaggttcggctcaatgacagaagagccaaa
cgacctcatttcagaacaaggctaataggaagggacaatgcaattgcgcggcatggaatt
catggtctgtactggttttatagcattaacgtgccaagccgtctgcttcgccaaggaaac
aacactgtatatctcactcagtcaagaagcaaatcccctgttggaggaattatgtatgat
tacattcgtttagaagggcctccagaaacgggtccgagtgtagaatga
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